Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00402 ATGGTGAAGTTTACAGCAGAAGAGCTTCGGCGTATTATGAACTTGAAGCACAACATTCGCAATATGTCTGTTATTGCACACGTTGATCACGGAAAATCCACTCTCACTGATTCTCTGGTGGCTGCTGCTGGTATCATTGCAAAGGAAGCCGCCGGCGACGTCCGGATGACGGACACACGGCAGGACGAAGCAGAGCGCGGCATCACAATCAAGTCTACCGGAATATCCCTCTATTATGAGATGACTGATGAAGCTCTCAAGAACTTCAAGGGAGAGAGGCAGGGTAATGAGTATCTCATCAACCTCATTGATTCCCCTGGCCATGTGGATTTCTCATCTGAGGTTACAGCCGCATTGCGCATCACCGATGGCGCACTCGTGGTGGTGGATTGTATTGAAGGTGTCTGTGTCCAAACCGAAACTGTTCTCCGGCAAGCCCTCGGTGAAAGGATCAGACCTGTTCTCACCATTAATAAGATGGACAGATGCTTCCTTGAGCTTCAAGTGGAGGGAGAAGAAGCATACCAGACATTCCAAAAGGTTATTGAGAATGCTAATGTTATCATGGCTACATATGAAGATCCCCTTCTTGGTGATGTTCAGGTCTACCCGGAGAAAGGGACCGTCGCGTTCTCCGCCGGTTTACACGGCTGGGCGTTCACTCTGACCAACTTTGCTAAAATGTATGCTTCTAAGTTTGGAGTTGATGAGTCCAAGATGATGGAGAGGTTGTGGGGTGAGAATTTCTTTGATCCAGCAACTAAGAAATGGACAACCAAGAACACAGGCTCTCCAACTTGTAAGCGAGGTTTTGTTCAGTTTTGTTATGAGCCAATCAAACAGATGATCGCAACTTGTATGAATGATCAGAAGGACAAGCTCTGGCCTATGCTGCAGAAGCTTGGTGTCACCATGAAACTTCTTGAAATGATGGTGTTCCATCTTCCTTCCCCTTCAAAGGCACAAAGGTACCGTGTGGAGAATCTCTATGAGGGTCCTCTCGATGATCCTTACGCAACCGCCATCAGAAACTGCGATCCTGAGGGACCGTTGATGCTATATGTATCCAAAATGATTCCTGCTTCTGATAAGGGAAGGTTTTTCGCCTTCGGCCGAGTGTTCTCCGGCAAGGTCTCGACCGGTTTGAAAGTAAGAATCATGGGTCCGAATTATGTTCCGGGACAGAAGAAAGACTTGTATGTGAAGAATGTGCAGAGAACTGTGATTTGGATGGGGAAGAAGCAGGAAACTGTTGAGGATGTTCCATGTGGTAACACAGTAGCCATGGTTGGGTTGGACCAATTCATTACCAAGAATGCAACCTTGACAAACGAGAAGGAGGCCGACGCACACCCGATTCGCGCCATGAAGTTCTCCGTTTCGCCGGTGGTGCGAGTTGCCGTGCAGTGCAAGGTAGCTTCAGACCTTCCCAAACTTGTTGAAGGCCTAAAACGGTTATCGAAATCGGATCCCATGGTAATGTGCACCATAGAAGAGTCAGGGGAGCACATCATCGCCGGCGCCGGCGAGCTCCATCTTGAGATCTGTCTGAAGGACTTGCAGGAAGATTTCATGGGAGGTGCTGAGATAATAAAATCCGACCCTGTGGTGTCGTTCCGCGAGACTGTTCTAGAACGTTCTTGCCGTACCGTGATGAGCAAGTCACCCAACAAACATAACCGTCTCTACATGGAAGCAAGGCCAATGGAGGAAGGTCTCGCGGAGGCCATCGACGAGGGCCGAATCGGTCCAAAAGACGACCCCAAAAACCGGTCGAAGATTCTCTCGGAAGAATTCGGATGGGACAAGGATCTGGCCAAGAAAATCTGGTGCTTCGGACCGGAAACCATTGGGCCTAACATTGTGGTTGACATGTGTAAGGGTGTTCAGTACCTGAACGAAATCAGGGACTCCATTGTAGCTGGATTCCAATGGGCTTCAAAGGAAGGAGCACTGGCCGAAGAAAACATGAGAGGAATCTGCTTTGAAGTCTGTGATGTGGTTCTCCACGCCGACGCAATCCACAGAGGTGGTGGCCAGATCATTCCAACCGCAAGAAGAGTATTCTACGCGTCGCAGTTAACCGCGAAACCGAGGCTTCTGGAACCGGTTTACCTTGTTGAAATCCAAGCACCTGAACATGCACTGGGTGGGATATACAGTGTGCTGAACCAGAAGAGAGGCCATGTGTTCGAGGAAATGCAGAGGCCTGGAACACCGTTGTATAATATCAAAGCTTATTTGCCGGTGATTGAGTCCTTTGGATTCTCGAGCACTCTCAGAGCTGCCACTTCCGGTCAGGCTTTCCCTCAGGCCGTGTTTGATCATTGGGATATGATGTCTTCTGATCCGTTGGATCCTGGGTCCCAAGCTTCTCAGCTTGTTATTGATATTCGTAAGAGAAAAGGCTTGAAGGAGCAGATCACACCTCTCTCTGAATATGAAGACAAGCTCTGA 2457 0.4892 MVKFTAEELRRIMNLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAKEAAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDEALKNFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTINKMDRCFLELQVEGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGFVQFCYEPIKQMIATCMNDQKDKLWPMLQKLGVTMKLLEMMVFHLPSPSKAQRYRVENLYEGPLDDPYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGQKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEADAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLSKSDPMVMCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPKDDPKNRSKILSEEFGWDKDLAKKIWCFGPETIGPNIVVDMCKGVQYLNEIRDSIVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEHALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQAVFDHWDMMSSDPLDPGSQASQLVIDIRKRKGLKEQITPLSEYEDKL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00402 818 SMART EFG_C_a 699 794 IPR000640 -
Arst3g00402 818 Gene3D Elongation Factor G (Translational Gtpase), domain 3 460 538 - -
Arst3g00402 818 Gene3D - 545 697 IPR014721 -
Arst3g00402 818 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 253 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 Pfam Elongation factor Tu GTP binding domain 17 317 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 CDD EF2_snRNP_III 462 534 - -
Arst3g00402 818 FunFam Translation elongation factor 2 698 818 - -
Arst3g00402 818 SUPERFAMILY EF-G C-terminal domain-like 702 813 IPR035647 -
Arst3g00402 818 NCBIfam small GTP-binding protein domain 20 168 IPR005225 GO:0005525
Arst3g00402 818 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 817 - -
Arst3g00402 818 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 817 - -
Arst3g00402 818 Gene3D - 698 818 - -
Arst3g00402 818 Pfam Elongation factor Tu domain 2 369 442 IPR004161 GO:0005525
Arst3g00402 818 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 PRINTS GTP-binding elongation factor signature 117 128 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 PRINTS GTP-binding elongation factor signature 153 162 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Arst3g00402 818 CDD aeEF2_snRNP_like_IV 534 706 - -
Arst3g00402 818 Gene3D - 3 237 IPR027417 -
Arst3g00402 818 Pfam Elongation Factor G, domain III 462 524 IPR041095 -
Arst3g00402 818 FunFam Translation elongation factor 2 544 697 - -
Arst3g00402 818 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Arst3g00402 818 SMART EFG_IV_2 580 697 IPR005517 GO:0005525
Arst3g00402 818 SUPERFAMILY Translation proteins 318 451 IPR009000 -
Arst3g00402 818 FunFam Translation elongation factor 2 3 237 - -
Arst3g00402 818 CDD EF2 20 230 - -
Arst3g00402 818 CDD eEF2_snRNP_like_C 702 780 - -
Arst3g00402 818 SUPERFAMILY Ribosomal protein S5 domain 2-like 537 701 IPR020568 -
Arst3g00402 818 FunFam Translation elongation factor 2 461 538 - -
Arst3g00402 818 Pfam Elongation factor G, domain IV 586 697 IPR005517 GO:0005525
Arst3g00402 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 321 IPR027417 -
Arst3g00402 818 SUPERFAMILY EF-G C-terminal domain-like 459 535 IPR035647 -
Arst3g00402 818 CDD EF2_II 350 445 - -
Arst3g00402 818 FunFam Translation elongation factor 2 318 459 - -
Arst3g00402 818 Gene3D Translation factors 318 459 - -
Arst3g00402 818 Pfam Elongation factor G C-terminus 699 785 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00402 Arst-Chr3 2833170 2836905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00402 1 818 Eukaryotic Initiation Factors Gene Family AT1G56070 88.612 0.0 1570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00402 K03234 - tcc:18594569 1562.36