Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00390 ATGGTTGTTGTGTACTATATAGAGATCTCGCAGTACCTGTCTGTGGTTTCTGGCAAACCAGCATATCTTGATGAAGATGAAGTTTTATTTTCCATTGGGAGGAAGACAATAAAGGAGTTACGTGCTGCAGCGGATGTTGGATTCTATGTTGTTCGGGCCACTGTTCTTGATGTTGAACCCGTTCCAAGTTGGTGGTATAAATCATGTGTTTGCAGCGTGAAGGCAGAAGCTAATGCGGATGAATACTTCTGCGATGGCTGTAATAGGGATGTGAATAATGTGGTTGACAGGTATAAGTTGAATTTGTTGGTTTTTGATGGTACTGGTACAACGAACTTTGTTGTGTTCGATAAGGAGGTCGCAGCACTATTCGGACGAACCTGTACTGAGATGGTGAAAGAGTTGAATGAAAAAGGGAAAGCAAGCAAAGATCCTACTGGTTTTAATGAGTTTTTCCTTGATAAGGAGTTTCTATTCAAGGTCGAAGTAGAAACTACTGGATGGTGCGATTCTTATGATGTATCGGTGATACGTTCTGATTCTACCAATTTACCGAGGTGGAGGGACACTCAAGGCCCGGTAAAATCTGGTGTACCCCGTGCTGGTCCTATTAACCCTATGCATCCTCGAGGTGAAGATGAATGTTCTGTTTGTGATGAGTCACCTGATCCAATCGTGAAAAATTTGTCTGTTATTAAAAGACCTGTTGTGAGGCGTCTGTTGGATGAGTTCAACATGTCTGGTGCTCCTTCCATTAAAAAGTAG 765 0.4235 MVVVYYIEISQYLSVVSGKPAYLDEDEVLFSIGRKTIKELRAAADVGFYVVRATVLDVEPVPSWWYKSCVCSVKAEANADEYFCDGCNRDVNNVVDRYKLNLLVFDGTGTTNFVVFDKEVAALFGRTCTEMVKELNEKGKASKDPTGFNEFFLDKEFLFKVEVETTGWCDSYDVSVIRSDSTNLPRWRDTQGPVKSGVPRAGPINPMHPRGEDECSVCDESPDPIVKNLSVIKRPVVRRLLDEFNMSGAPSIKK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00390 254 CDD RPA1_DBD_C 35 164 IPR047192 -
Arst3g00390 254 SUPERFAMILY Nucleic acid-binding proteins 33 174 IPR012340 -
Arst3g00390 254 Gene3D - 30 185 IPR012340 -
Arst3g00390 254 MobiDBLite consensus disorder prediction 187 213 - -
Arst3g00390 254 Pfam Replication factor-A C terminal domain 48 171 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00390 Arst-Chr3 2805359 2807120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00390 48 150 Core DNA Replication Machinery Family AT5G61000 29.524 2.29e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00390 - - adu:107477080 523.087