Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00379 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACGGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGCCCACGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTTAATCGCGCCTCAAAGAACACTTTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGCGACGACGAGGAAGAGATCGATCCGGCCGGTTCGGGATCCAATTCGAGGAAGCTCCGGAAGGTCGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCCGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTTGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAATGACAGCGGCGGAGGAGGAGCAGGAGGAGGTGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCAATGATGCCAATGCCGATGCTCGGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATGTCACTCCTAATGATAAATGA 858 0.6037 MGEEVRMTDYQDDDGVADWELGLPAAHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTFSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIDPAGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGAGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLGMPHGFHHHHVLQQRDWSYPPHVTPNDK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00379 285 MobiDBLite consensus disorder prediction 77 130 - -
Arst3g00379 285 FunFam Two-component response regulator 130 193 - -
Arst3g00379 285 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Arst3g00379 285 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
Arst3g00379 285 MobiDBLite consensus disorder prediction 199 217 - -
Arst3g00379 285 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Arst3g00379 285 Gene3D - 131 193 - -
Arst3g00379 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Arst3g00379 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 267 IPR044841 GO:0003700|GO:0006355
Arst3g00379 285 MobiDBLite consensus disorder prediction 199 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00379 Arst-Chr3 2758131 2759353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00379 1 267 G2-like Transcription Factor Family AT3G46640 52.397 1.83e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g00379 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00379 - - aprc:113858844 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00379 3 2758131 2759353 Arst3g00379 3 2758131 2759353 ECH