Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00366 ATGGATCCAAATTATCCTATAGGCGGCAGTGATGATTTCATGAACAGCTTCCAAATTGGTGAAGATGGCACCATAATATTCTCTGATGATCAAAATCAGTTTTATTATGATGCCAACCAACACCTTGATCCTCTTTACCAGCATGTTGCAGACCAACTTTTTGATGAATTTCCTCAGTACACAAGCTATGTGGAAGAAGCTGCAGCTGCTCCTGTTGCCTCCACCGCGGTGGATCCTTCTGTTGAGGACGCTGATTTCTCAGAAACAGCAAAGTTTATAACACAAGTTCTCATGGAAGAGGGTGTTGAACAAAGGCCATTCTATGACCCTTTCAGCTTGAATGCCACTGAGCAATCCTTCTATGATGCTCTTAACGATGTTCTCATAGACAACATCAACTTGCCACTCTCCCCCAATGAACACCCTCTTGATGTTCATCATCAAGGTGGAACAACCAGCAGCAGCAGCAGCGGCAGCAACAGTGGCAACAACAACGACAATCAAAACAATAACAACCCTGTTGATGAGAACTCTAGCGAGTTTCTGAAGCCTTCTGTTTCTCCTGATACCTTTACCTCTGGTGATCATCCTTTTCAGTTTAACTCCCATGCCATTTCTCAACATGACTCGAATGCTTCCTATGTTACTAATTTTGGTGTGTATGATGTGGATACTTCTTTTACCAAGTTGTTGGCTCAAAATATTTTCAGCGACTCAGATTCTGTCTCCCAGTTCAGGAGAGGCTTAGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTCAGCTTGTGACTGGTTTTGAGACCACACCGGCTGTCGCTGTGCCTATAGACGAACTAAAGGGAGATAAAGCCGTTGGGTTAAAGGGCAGAAAGAATCATGAACGTGAAGAATGGAGTGATGATACAGAAGAAGGGAGGAGTAACAAGCATTCGGCAACTAGCAGTGTAGTTGATGAGAGTGAATTATCTGAAATGTTTGATAAAGTATTGCTTAGTATTGGTGCCCCAATGTGCTTTCCAGTAAACAATGAAGTAGAGAAAGCTTCTAATCCCTCAACCTCTAATGGAGGGAAGGGTCGTCCTAAGAGACAAGGGAAGAAGAAGGAAACCATTGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTATCTGCTTGTGACAACAGGACTGCCACTGAGCTTCTCAAGCAAATTAGGCAGCATTCGACTCCCTCTGGGGATGCAACGCAAAGAACGGCTCATTACTTCGCCAATGGCCTTGAAGCACGCTTGCATGGTGATGGCACTGGAACACAAGGATTCTACACCTATGTCAGCACCAAGAGGCTAAGTGCTGCTGAGTTTTTGAAAGCTTACAAGGTGTTCATGAGTGCCTGCCCTTTTTCGAAGTTTGCAAATTTCTTTGCAAACAAGATGATAATGAAAGCTGCTCAAAATGCAGAAACACTTCACATCATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTGATTAAGTTCCTCTCAGACAGAGAAACTGGACCCCTCAAGAAGCTGAAGATCACAGGAATAGAGTTTCCCCAACCTGGTTTCCGTCCTGCAGAAAGACTTCACGAGACTGGTCGTCGTCTTGCTAACTACTGCGAGCGTTTCAAGGTTCCCTTCGAGTATAATGCCATAGCATCAAGGAACTGGGAAACCATCCAGGTTGAAGACCTTAAAATTGAGAGCAATGAGTTTCTTGCTGTGAACTGTCATAAGAGGTTTGAGAATTTGATGGATGAAACAATTGAAGTGAACAGTCCTAGAGATGCAGTGTTGCAGTTGATCAGGAAGATAAATCCGGATATTTTTGTTCAGGCCATTGTTAATGGATCTTATAATGCACCTTTCTTTGCCACACGATTCAGGGAGGCACTGTTCCATTTTTCTGCAATTTATGACATGTGTGATGCTGTCATCCCCCGTGACAATGAGAAGAGAATGAAGATTGAGAGAGAGATTATAGGCCGGGAGGTTTTGAATGTTGTGGCGTGCGAAGGTTTTGAAAGGATTGATAGGCCTGAGACATACAAGCAATGGCAGGCTAGGAATACAAGGGCTGGTTTCAAGCAGCTTCCCTTGAATGAGGAGCTAATGGCCAAATTTTCAGCCAAGTTAAAGGAATGGTACCACAAAGACTTTGTCTTCGATGAGGATGGCAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTCTTATACGCTTCCACTTGTTGGGTGCCTGCATAG 2256 0.4415 MDPNYPIGGSDDFMNSFQIGEDGTIIFSDDQNQFYYDANQHLDPLYQHVADQLFDEFPQYTSYVEEAAAAPVASTAVDPSVEDADFSETAKFITQVLMEEGVEQRPFYDPFSLNATEQSFYDALNDVLIDNINLPLSPNEHPLDVHHQGGTTSSSSSGSNSGNNNDNQNNNNPVDENSSEFLKPSVSPDTFTSGDHPFQFNSHAISQHDSNASYVTNFGVYDVDTSFTKLLAQNIFSDSDSVSQFRRGLEEASKFLPPGPQLVTGFETTPAVAVPIDELKGDKAVGLKGRKNHEREEWSDDTEEGRSNKHSATSSVVDESELSEMFDKVLLSIGAPMCFPVNNEVEKASNPSTSNGGKGRPKRQGKKKETIDLRTLLVLCAQAVSACDNRTATELLKQIRQHSTPSGDATQRTAHYFANGLEARLHGDGTGTQGFYTYVSTKRLSAAEFLKAYKVFMSACPFSKFANFFANKMIMKAAQNAETLHIIDFGILYGFQWPILIKFLSDRETGPLKKLKITGIEFPQPGFRPAERLHETGRRLANYCERFKVPFEYNAIASRNWETIQVEDLKIESNEFLAVNCHKRFENLMDETIEVNSPRDAVLQLIRKINPDIFVQAIVNGSYNAPFFATRFREALFHFSAIYDMCDAVIPRDNEKRMKIEREIIGREVLNVVACEGFERIDRPETYKQWQARNTRAGFKQLPLNEELMAKFSAKLKEWYHKDFVFDEDGNWMLQGWKGRVLYASTCWVPA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00366 751 MobiDBLite consensus disorder prediction 345 359 - -
Arst3g00366 751 MobiDBLite consensus disorder prediction 344 367 - -
Arst3g00366 751 MobiDBLite consensus disorder prediction 139 195 - -
Arst3g00366 751 MobiDBLite consensus disorder prediction 287 308 - -
Arst3g00366 751 Pfam GRAS domain family 373 748 IPR005202 -
Arst3g00366 751 MobiDBLite consensus disorder prediction 287 318 - -
Arst3g00366 751 MobiDBLite consensus disorder prediction 146 195 - -
Arst3g00366 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 312 744 IPR005202 -
Arst3g00366 751 ProSiteProfiles GRAS family profile. 364 749 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00366 Arst-Chr3 2664154 2667418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00366 91 751 GRAS Transcription Factor Family AT1G07530 48.664 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g00366 GRAS 7.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00366 - - pcin:129314564 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01563 8 24685984 24693605 Arst3g00366 3 2664154 2667418 PCT
Arst3g00366 3 2664154 2667418 Arst8g01706 8 25598636 25601771 PCT