Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00365 ATGCCTTTGAAAATGGATCCTAATTTCAACTCCAGTTTCCTCAATGGATTTAGATTCAACCAAGTTCCCACTATCCCCAATGTAGAGGAACAGTGCCCTGATCCTGTAAATGGGTTGGAAACCATGAACTTTGGATTCATGAATGACCCTTTTCTTCTTCCACCTGATCAAAACAATTCTCAAAATCCTACTTCTTCTATTTCCACCATTACTGCAGATGAAGATTCTCCCTTGGATGACACCGATTTCTCTGCAACCGTACTACGATACATAAACCAGATGCTTATGGAAGAGGACATGGAGGAGAAGCCTTGTATGTTCCATGATTCATTGGCTTTACAAGCTGCTGAGAAATCATTGTATGATGCCATTGGTGGGACATACCCTCATCTTCCTCCTCATCCTCTTTCTTCTTCCATACAGCATCAAGCTCAAAACTACCACAATGTTGAAAGCCCTGATGATAGCCTCTCTAGTAACTTCAGTAGTTATAGTAGCGGCCTCAGCACCATTAGTACTAGCAACTTGGTTGAGTCACATTGGAGCAACTTTGACCCTTCAGAGTATAAGCCTTCTATACTACAAACGGCGAGTTCGAACCCCGGCACACAGTCTTCCACGAACAATAGAAATAGCTTTACTACAGCCAACAATGGTGGTGGATTGTTGGGGAGTTCAGGTGCTGGATTTTTCGATTCATCATTTCTGAGCAAAAGTGAGTCCATGCTGCAGTTTAAGAGGGGAATGGAGGAAGCCAGTAAGTTTCTTCCTAAGGGGAATCCACTGGTTATTGACTTGGAGAATAGCACCTTTAACCCTTCTTTTCAAAAGGCTCCTCAGCATGTGGACATTAAGGAGGAGAGAGATGAAAGGGAGTATTTTTCTGGTGAGTCAAAAGGGAGAAAGAATCACGAGCGGGAAGATCAAGTGGAATTACAAGATGGGAGGAGCAACAAACAGTCTGCGATTTACAGGGAAGACAGTGAGCTATCAGAATTGTTTGATAAAATACTGCTCGGCACAGGGTGTGGAAAAGAGGCACCTCCCAGATGCATTTGTGACGAAGACAAACCTAATGGGCAAGACAAGAATGTGCAGCAAAAGGAAGAAACAAACAAGTTTAGCAGTGGAAAGAATCGTGTTAAGAAACAAGGTAATAAGAAGGGAGTTGTTGATCTGAGGACCCTATTGGTTCTGTGCGCACAAGCTGTTTCATCTGATGATCATTCAACTGCTAATGAGTTATTGAAGCAGATTAGACAGCACTCTTCACGTCTAGGTGATGGGTCTCAGAGGCTGGCACATTGTTTTGCAAATGCCCTTGAAGCACGCTTGGCCGGCTCTGGCACCCAGCTATACACTTCTCTGACCTCCAAAAGAAAATCTGCTGCAGATATGGTGAAAGCATATCAAATGTTTATATCAGCCTGCCCATTCAAGAAGCTTGCTATCATTTTTGCTAACCATACAATTCTGAACCTACCCAAGCCCAAGGAAGTGGAAACTCTTCATATTGTTGATTTTGGTATCCGTTACGGCTTCCAGTGGCCTGCCCTTATTTTTCGTCTATCAAATAGACCTGGTGGTCCTCGCAAGCTGCGCATAACAGGGATCGAGCTTCCACAACCAGGTTTCAGGCCAGCAGAGAGAGTCCAGGAGACAGGGCGTCGCCTAGCTAAGTATTGTGAACGCTTTAATGTTCCTTTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACCTGAAGATAAAAGAAAATGAACTTCTTGCAGTGAATTGTATGGTTCGGTTTAAGAATCTACTTGATGAGACTGTTGTGTTGAATAGTCCAAGGGATGCTGTCTTGAAATTAATTAGGAAGGCCAATCCTAATATATTTATACACGCTACTGTCAATGGGAACTACAATGCCCCATTCTTTGTGACACGGTTCCGGGAGGCTCTTTTTCATTACTCTACATTGTTTGATGTGCTTGACACCAATGTTGATCGCGAAGATCCAATGAGGTTGATGTTTGAGGAGGAGTTCTTTGGCAGGGAGGTAGTGAATATTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGCGACCCGAAACATACAAGCAATGGCAGGTTCGGAATACAAGGGCAGGGTTTAGGCAACTCCCCTTGGATGACCACCTCATTCACAAACTAAGATGTAAACTGAAAGATGTGTACCATGGTGATTTCATGCTTGATGTGGATGGCAACTACATGCTTCAAAGTTGGAAGGGCCGAATCATTTATGCTTCCTCTTGTTGGATACCAGCATAG 2307 0.4352 MPLKMDPNFNSSFLNGFRFNQVPTIPNVEEQCPDPVNGLETMNFGFMNDPFLLPPDQNNSQNPTSSISTITADEDSPLDDTDFSATVLRYINQMLMEEDMEEKPCMFHDSLALQAAEKSLYDAIGGTYPHLPPHPLSSSIQHQAQNYHNVESPDDSLSSNFSSYSSGLSTISTSNLVESHWSNFDPSEYKPSILQTSFPADFVFQASSNPGTQSSTNNRNSFTTANNGGGLLGSSGAGFFDSSFLSKSESMLQFKRGMEEASKFLPKGNPLVIDLENSTFNPSFQKAPQHVDIKEERDEREYFSGESKGRKNHEREDQVELQDGRSNKQSAIYREDSELSELFDKILLGTGCGKEAPPRCICDEDKPNGQDKNVQQKEETNKFSSGKNRVKKQGNKKGVVDLRTLLVLCAQAVSSDDHSTANELLKQIRQHSSRLGDGSQRLAHCFANALEARLAGSGTQLYTSLTSKRKSAADMVKAYQMFISACPFKKLAIIFANHTILNLPKPKEVETLHIVDFGIRYGFQWPALIFRLSNRPGGPRKLRITGIELPQPGFRPAERVQETGRRLAKYCERFNVPFEFNAIAQKWETIKIEDLKIKENELLAVNCMVRFKNLLDETVVLNSPRDAVLKLIRKANPNIFIHATVNGNYNAPFFVTRFREALFHYSTLFDVLDTNVDREDPMRLMFEEEFFGREVVNIIACEGSERVERPETYKQWQVRNTRAGFRQLPLDDHLIHKLRCKLKDVYHGDFMLDVDGNYMLQSWKGRIIYASSCWIPA 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00365 777 MobiDBLite consensus disorder prediction 358 386 - -
Arst3g00365 777 MobiDBLite consensus disorder prediction 283 333 - -
Arst3g00365 777 MobiDBLite consensus disorder prediction 53 74 - -
Arst3g00365 777 MobiDBLite consensus disorder prediction 289 333 - -
Arst3g00365 777 Pfam GRAS domain family 402 774 IPR005202 -
Arst3g00365 777 ProSiteProfiles GRAS family profile. 393 775 IPR005202 -
Arst3g00365 777 MobiDBLite consensus disorder prediction 52 78 - -
Arst3g00365 777 MobiDBLite consensus disorder prediction 358 394 - -
Arst3g00365 777 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 316 768 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00365 Arst-Chr3 2659546 2662878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00365 87 777 GRAS Transcription Factor Family AT1G07530 55.508 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst3g00365 GRAS 1.4e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00365 - - ahf:112736647 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00365 3 2659546 2662878 Arst3g00365 3 2659546 2662878 ECH
Arst8g01706 8 25598636 25601771 Arst3g00365 3 2659546 2662878 PCT