Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00340 ATGGAGGACGGAGGGAGTTCAAGGTGGAACCCTACGAAGGAGCAGATAAGCATGTTGGAGAATCTTTATAAGCAGGGAATAAGAACACCAAGCGCTGAAGAGATTCAGCAAATAACAGCGAGGTTGAGAGCCTATGGTCACATCGAAGGCAAGAACGTCTTCTACTGGTTTCAGAATCACAAAGCCAGACAGAGACAGAAGCAGAAGCAACACACTCTCGCTTACTTCAATCGCTCTTTTCTCCATCATCATCATCAACCTGCAGGTACGATGAGGAGAATCCCCGATAATAATCATAGCGAAGATGAAACAATGTTTGATAAGCAACAAGATAGAACGTTGGATCTTTTCCCTCTTCACCCAACTGGCATATTGGAAGGGAAGAAGGAAACACAAGATAACAACAACAACAACATGATGACCATGATGTGCTCTTTCATGGCGCCTTCTTCTTCATCATCGTCTGATACTACTCATGATGATGGACATGGCTATAGGCACCAACAACAACAACTACCCTTCTTTGATTTCTTCGTCACTTCTGGACATGGACAAGGATCGTTTGAGAGTGGCTAA 576 0.4392 MEDGGSSRWNPTKEQISMLENLYKQGIRTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQHTLAYFNRSFLHHHHQPAGTMRRIPDNNHSEDETMFDKQQDRTLDLFPLHPTGILEGKKETQDNNNNNMMTMMCSFMAPSSSSSSDTTHDDGHGYRHQQQQLPFFDFFVTSGHGQGSFESG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00340 191 SMART HOX_1 4 71 IPR001356 GO:0003677
Arst3g00340 191 Gene3D - 6 75 - -
Arst3g00340 191 FunFam WUSCHEL-related homeobox 4 6 73 - -
Arst3g00340 191 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 87 IPR044555 GO:0003700|GO:0099402
Arst3g00340 191 CDD homeodomain 8 68 IPR001356 GO:0003677
Arst3g00340 191 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Arst3g00340 191 SUPERFAMILY Homeodomain-like 4 73 IPR009057 -
Arst3g00340 191 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00340 Arst-Chr3 2474400 2475401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00340 6 82 Wox Gene Family AT5G59340 84.416 5.32e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst3g00340 Homeodomain 2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00340 - - ahf:112736626 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00340 3 2474400 2475401 Arst3g00340 3 2474400 2475401 ECH