Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00313 ATGGTTAATTGCTTGATGTTACTAACAAAAGTTGGTGAGACCAAAACCAATAACCATCCATTGAAGGGTGGTGGCTTTAAGTGCAAGACATGTCATAGGAGGTTCCTATCTTTTCAAGCACTTGGAGGACACAGAGCGAGTCATAAGAAGCTTAAGCTCATGATGGGTGCAGATCTTTCGTGTCAATTACCGTCAAGTTCTTCGTTATCATCGTGGAACATGATGACGAAGAACAAGATGCACTCGTGTTCTATTTGTGGGCTGGAGTTTGCGGTTGGACAAGCCCTTGGAGGACATATGAGAAAGCATAGAAATGGTGGAATGGTAATTCATGATCATGGTGCCATGACCAAATCTACTAGTGATGGTAGTGTTAAAACTAGAAGGTTTAATTTGTGCTTAGACTTGAACCTCACGCCCTCTGAGAATGATCTCAAGCTTAATTAA 447 0.4161 MVNCLMLLTKVGETKTNNHPLKGGGFKCKTCHRRFLSFQALGGHRASHKKLKLMMGADLSCQLPSSSSLSSWNMMTKNKMHSCSICGLEFAVGQALGGHMRKHRNGGMVIHDHGAMTKSTSDGSVKTRRFNLCLDLNLTPSENDLKLN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00313 148 PANTHER ZINC FINGER PROTEIN ZAT5 3 143 - -
Arst3g00313 148 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Arst3g00313 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Arst3g00313 148 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Arst3g00313 148 Gene3D Classic Zinc Finger 23 103 - -
Arst3g00313 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 103 IPR013087 -
Arst3g00313 148 Pfam C2H2-type zinc finger 81 104 - -
Arst3g00313 148 Pfam C2H2-type zinc finger 26 50 - -
Arst3g00313 148 SUPERFAMILY beta-beta-alpha zinc fingers 26 103 IPR036236 -
Arst3g00313 148 SMART c2h2final6 81 103 IPR013087 -
Arst3g00313 148 SMART c2h2final6 26 48 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00313 Arst-Chr3 2329915 2330573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00313 1 148 C2H2 Transcription Factor Family AT2G28710 46.104 4.11e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g00313 zf-C2H2_6 5.8e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00313 - - adu:107476874 292.352