Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00309 ATGGTTGAAGAGGAATTCCGAAAGGGTCCTTGGACCGAACAAGAGGACTTCAAACTTGTGTCTTATGTTGGCTTATTTGGGGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAATAGGACAGGTAAGAGTTGCAGGTTGCGATGGGTTAATTATCTCCATCCTGGTCTCAAACATGGTAAGATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAACAACATCACTAATAACACGATGGTGAAAGAAGATGATGGAATAATAATTAATAGTGATAGTAACAATGTTGTTGATGATGATTACTCTATGGATGATATATGGAATGATATCGCCATGTCTGAACAACACAACAACTTTATTTCTTCTTCTTCTTCTTCTTCAGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAATGCAATTCTATCTGTGAGGGACTGCAATGAATGGCATACATCACACTTCACACATGTTTTTGAAAATACCGTGTTTATGAGGCGCAGAGAAAGGAATAGCAAAAGAGGAAGAATGGGTGGCTTATCAAAACTGTATCTCCTCTCTTACAACTCTCTTCAGGCAATTGGCTGGGCTGTTTCGTCATTTCAGATTTTGTGCAACCTCCTATCCACTTCTTCTGTCGCCGGAGCTTACTCCTCCGCTGGAAAATTGATAAGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACATGGAGCCATTGGGCTTGTGCCAAGTGGAGCATTGCTTCCTCTCATGCAATGGGGAGGGAGGACACATTTTCTGCTTGCTATTGTTAGCAAACTTGATGAGGTCCAGCAGTTACCTTCAGTTTTTATCACCTTTTTCGCATGGAGCATAAGCGAGGTCATTAGATACTCACATTATGCTTTTAGCTGCATTGGAAATTGCCCTTATTGGATAACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTAGGTCCTGGTGAAATTTGGATCATGTACCAGGCACTTCCAATTGTAAAGAAGAAGAACCTCTATTCGGAAACCTTTTCAGGCCTCCCATTTAGCTACTATGATTTCCTTAAGGTTGTACTTATCATTTATCCATTCCTTTGGCTCAAACTTTATCTGCATTTGTTCAGGCAGCGGCGTTCAAAACTCTTTAAGCGCCAAGATAAGAAAAGAGCGTGA 1458 0.4191 MVEEEFRKGPWTEQEDFKLVSYVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKHGKMSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNGNNNNITNNTMVKEDDGIIINSDSNNVVDDDYSMDDIWNDIAMSEQHNNFISSSSSSSEPLPLWMIMDNQEQEQSNAILSVRDCNEWHTSHFTHVFENTVFMRRRERNSKRGRMGGLSKLYLLSYNSLQAIGWAVSSFQILCNLLSTSSVAGAYSSAGKLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFLLAIVSKLDEVQQLPSVFITFFAWSISEVIRYSHYAFSCIGNCPYWITYLRYTAFIVLYPLGVGPGEIWIMYQALPIVKKKNLYSETFSGLPFSYYDFLKVVLIIYPFLWLKLYLHLFRQRRSKLFKRQDKKRA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00309 485 MobiDBLite consensus disorder prediction 116 163 - -
Arst3g00309 485 Pfam Protein tyrosine phosphatase-like protein, PTPLA 319 476 IPR007482 -
Arst3g00309 485 FunFam Myb transcription factor 8 60 - -
Arst3g00309 485 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Arst3g00309 485 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 231 478 IPR007482 -
Arst3g00309 485 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Arst3g00309 485 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Arst3g00309 485 SMART sant 7 57 IPR001005 -
Arst3g00309 485 SMART sant 60 108 IPR001005 -
Arst3g00309 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Arst3g00309 485 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Arst3g00309 485 Gene3D - 8 60 - -
Arst3g00309 485 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Arst3g00309 485 CDD SANT 10 55 IPR001005 -
Arst3g00309 485 CDD SANT 63 104 IPR001005 -
Arst3g00309 485 Gene3D - 65 107 - -
Arst3g00309 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Arst3g00309 485 MobiDBLite consensus disorder prediction 106 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00309 Arst-Chr3 2288920 2293379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00309 1 198 MYB Transcription Factor Family AT5G59780 59.596 5.80e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g00309 PTPLA 2.1e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00309 K10703 - gmx:100527607 362.459