Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00308 ATGGTTGAAGAGGAATTCCGAAAGGGTCCTTGGACCGAACAAGAGGACTTCAAACTTGTGTCTTATGTTGGCTTATTTGGGGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAATAGGACAGGTAAGAGTTGCAGGTTGCGATGGGTTAATTATCTCCATCCTGGTCTCAAACATGGTAAGATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAATGTTTATGAGGCGCAGAGAAAGGAATAGCAAAAGAGGAAGAATGGGTGGCTTATCAAAACTGTATCTCCTCTCTTACAACTCTCTTCAGGCAATTGGCTGGGCTGTTTCGTCATTTCAGATTTTGTGCAACCTCCTATCCACTTCTTCTGTCGCCGGAGCTTACTCCTCCGCTGGAAAATTGATAAGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACATGGAGCCATTGGGCTTGTGCCAAGTGGAGCATTGCTTCCTCTCATGCAATGGGGAGGGAGGACACATTTTCTGCTTGCTATTGTTAGCAAACTTGATGAGGTCCAGCAGTTACCTTCAGTTTTTATCACCTTTTTCGCATGGAGCATAAGCGAGGTCATTAGATACTCACATTATGCTTTTAGCTGCATTGGAAATTGCCCTTATTGGATAACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTAGGTCCTGGTGAAATTTGGATCATGTACCAGGCACTTCCAATTGTAAAGAAGAAGAACCTCTATTCGGAAACCTTTTCAGGCCTCCCATTTAGCTACTATGATTTCCTTAAGGTTGTACTTATCATTTATCCATTCCTTTGGCTCAAACTTTATCTGCATTTGTTCAGGCAGCGGCGTTCAAAACTCTTTAAGCGCCAAGATAAGAAAAGAGCGTGA 1209 0.4367 MVEEEFRKGPWTEQEDFKLVSYVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKHGKMSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNEPLPLWMIMDNQEQEQMFMRRRERNSKRGRMGGLSKLYLLSYNSLQAIGWAVSSFQILCNLLSTSSVAGAYSSAGKLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFLLAIVSKLDEVQQLPSVFITFFAWSISEVIRYSHYAFSCIGNCPYWITYLRYTAFIVLYPLGVGPGEIWIMYQALPIVKKKNLYSETFSGLPFSYYDFLKVVLIIYPFLWLKLYLHLFRQRRSKLFKRQDKKRA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00308 402 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Arst3g00308 402 MobiDBLite consensus disorder prediction 116 144 - -
Arst3g00308 402 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 147 395 IPR007482 -
Arst3g00308 402 Pfam Protein tyrosine phosphatase-like protein, PTPLA 236 393 IPR007482 -
Arst3g00308 402 SMART sant 7 57 IPR001005 -
Arst3g00308 402 SMART sant 60 108 IPR001005 -
Arst3g00308 402 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Arst3g00308 402 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Arst3g00308 402 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Arst3g00308 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Arst3g00308 402 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Arst3g00308 402 CDD SANT 10 55 IPR001005 -
Arst3g00308 402 CDD SANT 63 104 IPR001005 -
Arst3g00308 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Arst3g00308 402 MobiDBLite consensus disorder prediction 106 148 - -
Arst3g00308 402 FunFam Myb transcription factor 8 60 - -
Arst3g00308 402 Gene3D - 65 107 - -
Arst3g00308 402 Gene3D - 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00308 Arst-Chr3 2288920 2293379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00308 1 121 MYB Transcription Factor Family AT5G59780 79.339 2.21e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g00308 PTPLA 1.4e-47 No_clan