Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00306 ATGGTTGAAGAGGAATTCCGAAAGGGTCCTTGGACCGAACAAGAGGACTTCAAACTTGTGTCTTATGTTGGCTTATTTGGGGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAATAGGACAGGTAAGAGTTGCAGGTTGCGATGGGTTAATTATCTCCATCCTGGTCTCAAACATGGTAAGATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAATGCAATTCTATCTGTGAGGGACTGCAATGAATGGCATACATCACACTTCACACATGTTTTTGAAAATACCGTGTTTATGAGGCGCAGAGAAAGGAATAGCAAAAGAGGAAGAATGGGTGGCTTATCAAAACTGTATCTCCTCTCTTACAACTCTCTTCAGGCAATTGGCTGGGCTGTTTCGTCATTTCAGATTTTGTGCAACCTCCTATCCACTTCTTCTGTCGCCGGAGCTTACTCCTCCGCTGGAAAATTGATAAGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACATGGAGCCATTGGGCTTGTGCCAAGTGGAGCATTGCTTCCTCTCATGCAATGGGGAGGGAGGACACATTTTCTGCTTGCTATTGTTAGCAAACTTGATGAGGTCCAGCAGTTACCTTCAGTTTTTATCACCTTTTTCGCATGGAGCATAAGCGAGGTCATTAGATACTCACATTATGCTTTTAGCTGCATTGGAAATTGCCCTTATTGGATAACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTAGGTCCTGGTGAAATTTGGATCATGTACCAGGCACTTCCAATTGTAAAGAAGAAGAACCTCTATTCGGAAACCTTTTCAGGCCTCCCATTTAGCTACTATGATTTCCTTAAGGTTGTACTTATCATTTATCCATTCCTTTGGCTCAAACTTTATCTGCATTTGTTCAGGCAGCGGCGTTCAAAACTCTTTAAGCGCCAAGATAAGAAAAGAGCGTGA 1284 0.4338 MVEEEFRKGPWTEQEDFKLVSYVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKHGKMSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNEPLPLWMIMDNQEQEQSNAILSVRDCNEWHTSHFTHVFENTVFMRRRERNSKRGRMGGLSKLYLLSYNSLQAIGWAVSSFQILCNLLSTSSVAGAYSSAGKLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFLLAIVSKLDEVQQLPSVFITFFAWSISEVIRYSHYAFSCIGNCPYWITYLRYTAFIVLYPLGVGPGEIWIMYQALPIVKKKNLYSETFSGLPFSYYDFLKVVLIIYPFLWLKLYLHLFRQRRSKLFKRQDKKRA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00306 427 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Arst3g00306 427 MobiDBLite consensus disorder prediction 116 144 - -
Arst3g00306 427 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Arst3g00306 427 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Arst3g00306 427 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Arst3g00306 427 SMART sant 7 57 IPR001005 -
Arst3g00306 427 SMART sant 60 108 IPR001005 -
Arst3g00306 427 FunFam Myb transcription factor 8 60 - -
Arst3g00306 427 Gene3D - 8 60 - -
Arst3g00306 427 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 173 420 IPR007482 -
Arst3g00306 427 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Arst3g00306 427 Gene3D - 65 107 - -
Arst3g00306 427 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Arst3g00306 427 CDD SANT 10 55 IPR001005 -
Arst3g00306 427 CDD SANT 63 104 IPR001005 -
Arst3g00306 427 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Arst3g00306 427 MobiDBLite consensus disorder prediction 106 148 - -
Arst3g00306 427 Pfam Protein tyrosine phosphatase-like protein, PTPLA 261 418 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00306 Arst-Chr3 2288920 2293381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00306 1 179 MYB Transcription Factor Family AT5G59780 60.326 1.66e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g00306 PTPLA 1.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00306 K10703 - gmx:100527607 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00306 3 2288920 2293381 Arst3g00306 3 2288920 2293381 ECH