Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00305 ATGGTTGAAGAGGAATTCCGAAAGGGTCCTTGGACCGAACAAGAGGACTTCAAACTTGTGTCTTATGTTGGCTTATTTGGGGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAATAGGACAGGTAAGAGTTGCAGGTTGCGATGGGTTAATTATCTCCATCCTGGTCTCAAACATGGTAAGATGTCTCCCCACGAACAACAACTTGTCATGCACCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCAAGAAAGTTGCCAGGGCGAACAGACAATGAGATCAAGAACTTTTGGAGGACTCAGATGAGGAAGCAGAAGGCACAGGAGAAGAAGCGTGCACCTGCAACCACACAATCATCTCCATCATCTTCGTCTACTAGTTACCAGTCCTCATCTTCTTCCAACAAGGATATTGGGGAAGAGAGCTTCTACGACACTGGAGGGCATAATGGTAATAACAACAACATCACTAATAACACGATGGTGAAAGAAGATGATGGAATAATAATTAATAGTGATAGTAACAATGTTGTTGATGATGATTACTCTATGGATGATATATGGAATGATATCGCCATGTCTGAACAACACAACAACTTTATTTCTTCTTCTTCTTCTTCTTCAGAACCACTGCCACTATGGATGATCATGGATAATCAAGAACAAGAACAAAGTAATGCAATTCTATCTGTGAGGGACTGCAATGAATGGCATACATCACACTTCACACATGTTTTTGAAAATACCGTGTTTATGAGGCGCAGAGAAAGGAATAGCAAAAGAGGAAGAATGGGTGGCTTATCAAAACTGTATCTCCTCTCTTACAACTCTCTTCAGGCAATTGGCTGGGCTGTTTCGTCATTTCAGATTTTGTGCAACCTCCTATCCACTTCTTCTGTCGCCGGAGCTTACTCCTCCGCTGGAAAATTGATAAGTTTTCTGCAATGTGCTGCATTCTTGGAAGTTATACATGGAGCCATTGGGCTTGTGCCAAGTGGAGCATTGCTTCCTCTCATGCAATGGGGAGGGAGGACACATTTTCTGCTTGCTATTGTTAGCAAACTTGATGAGGTCCAGCAGTTACCTTCAGTTTTTATCACCTTTTTCGCATGGAGCATAAGCGAGGTCATTAGATACTCACATTATGCTTTTAGCTGCATTGGAAATTGCCCTTATTGGATAACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTAGGTCCTGGTGAAATTTGGATCATGTACCAGGCACTTCCAATTGTAAAGAAGAAGAACCTCTATTCGGAAACCTTTTCAGGCCTCCCATTTAGCTACTATGATTTCCTTAAGGCAGCGGCGTTCAAAACTCTTTAA 1377 0.4212 MVEEEFRKGPWTEQEDFKLVSYVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKHGKMSPHEQQLVMHLHSKWGNRWSRIARKLPGRTDNEIKNFWRTQMRKQKAQEKKRAPATTQSSPSSSSTSYQSSSSSNKDIGEESFYDTGGHNGNNNNITNNTMVKEDDGIIINSDSNNVVDDDYSMDDIWNDIAMSEQHNNFISSSSSSSEPLPLWMIMDNQEQEQSNAILSVRDCNEWHTSHFTHVFENTVFMRRRERNSKRGRMGGLSKLYLLSYNSLQAIGWAVSSFQILCNLLSTSSVAGAYSSAGKLISFLQCAAFLEVIHGAIGLVPSGALLPLMQWGGRTHFLLAIVSKLDEVQQLPSVFITFFAWSISEVIRYSHYAFSCIGNCPYWITYLRYTAFIVLYPLGVGPGEIWIMYQALPIVKKKNLYSETFSGLPFSYYDFLKAAAFKTL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00305 458 Gene3D - 65 107 - -
Arst3g00305 458 Gene3D - 8 60 - -
Arst3g00305 458 MobiDBLite consensus disorder prediction 116 163 - -
Arst3g00305 458 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Arst3g00305 458 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Arst3g00305 458 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 178 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst3g00305 458 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Arst3g00305 458 Pfam Protein tyrosine phosphatase-like protein, PTPLA 319 452 IPR007482 -
Arst3g00305 458 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Arst3g00305 458 SMART sant 7 57 IPR001005 -
Arst3g00305 458 SMART sant 60 108 IPR001005 -
Arst3g00305 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Arst3g00305 458 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Arst3g00305 458 CDD SANT 10 55 IPR001005 -
Arst3g00305 458 CDD SANT 63 104 IPR001005 -
Arst3g00305 458 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Arst3g00305 458 MobiDBLite consensus disorder prediction 106 163 - -
Arst3g00305 458 FunFam Myb transcription factor 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00305 Arst-Chr3 2288920 2293382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00305 1 198 MYB Transcription Factor Family AT5G59780 59.596 9.37e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g00305 PTPLA 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00305 K10703 - aip:107610448 313.538