Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00293 ATGGCGAGATTGAAGGTGTACGAGCTGAGGAACAAAACGAAAGCAGAGCTTCTGAGCCAATTGAAGGATCTGAAAGCTGAGCTGGCACTCCTCCGTGTTGCCAAGGTCACTGGCGGAGCACCCAACAAGCTCTCCAAAATAAAATTGGTGCGGTTATCGATAGCGCAGGTGTTGACGGTTATTTCGCAGAAGCAAAAGTCGGTGCTGAGGGAAGCTTACAAGAAGAAGAAGAAGTATCTGCCTTTGGATCTGCGTCCTAAGAAGACCAGAGCTATCAGAAGACGCCTCACCAAGCACCGGGCTTCTTTGAAGACGGAGCGTGAGAAGAAGAAGGAAGTATACTTCCCATTGAGAAAATATGCAGTTAAGCAAAATAACTACTCCCTTTGA 390 0.4744 MARLKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKLVRLSIAQVLTVISQKQKSVLREAYKKKKKYLPLDLRPKKTRAIRRRLTKHRASLKTEREKKKEVYFPLRKYAVKQNNYSL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00293 129 FunFam 60S ribosomal protein L35 79 124 - -
Arst3g00293 129 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Arst3g00293 129 FunFam 60S ribosomal protein L35 1 77 - -
Arst3g00293 129 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Arst3g00293 129 Coils Coil 7 34 - -
Arst3g00293 129 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Arst3g00293 129 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Arst3g00293 129 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Arst3g00293 129 CDD Ribosomal_L29_HIP 8 64 - -
Arst3g00293 129 Gene3D - 79 123 - -
Arst3g00293 129 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00293 Arst-Chr3 2225933 2228020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00293 1 123 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 84.553 2.14e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00293 K02918 - gmx:100778013 210.69