Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00275 ATGGAGGAGAAAACATCCTCGTCGCCGTCAAACAGAACGACGTCGTTTCGGGGAGACCCTAGCGGCACGCTCCAAGTGTTGTCCAACCCTTCTTCGAACGAGAAACCGCCGCAAATCTCATCGCCGTTGCGATCTCAGGCTTCGAAATCTGCCCCTTCAGAAGCGTCCATTCCGTCGGAGGCGGCGGCGCAGAGGGCGGCGGAGTGGGGACTGGTGCTGAAGACAGACGAGGAGACAGGAAAGCCGCGGGGAGTGGCGCCTCGGACATCAGGCGGGGAGGTTGGCGGCGGAGCGAGTAGCAGCAGCAGTAGTAGTAGAGAAGTGAGGGTGGCGCGTGGAGTGCCACGTGTATCGGAGGATGTTAGAGCTGCGCTGTCGACGTTTCAACAGACGTTCGTAGTTTCGGACGCGATGAAAGCAGATTATCCGATTCTGTATGCGAGTGCTGGATTCTTCAAGATGAATGGTTACACCTCCAAAGAAGTCATTGGCAGAAACTGTCGGTTTTTACAGGGGGCAGATACAGATCCAGCTGACGTGGCAAAGATAAGGGAAGCTCTGAACATGGGGACAAGTTATTGTGGAAGGTTGCTTAACTACAAGAAAGATGGCACTCCCTTTTGGAACCTTCTCACTATTTCTCCAATCAAAGACCATGATGGAAATGTCCTCAAATTTATCGGAATGTTAGTGGAGGTTAGCAAGCACACAGAGGGGTCAAAGGAAAACATGTTACGCCCCAATGGACTCCCTGAATCATTGATTCGATATGCCGCTAGAGAGAAAGAGAAGGCAGGGAATTCAGCAAGAGAGTTAGTGGAAGCCATGAAGATGAAGATGAAGAGGCTCAGTGAATCAAACACAAACTCTAATGAGTCCAATAATAATAATAAGAAGAAGAACAACAAAGCAGCTCCTCCAAGATCATCATTATTAAGAAGAAAATCAGATAGTAGCATCATTACTTCTTCTACACGTAAATCACTTTCAGAACATTCTAGAAGCAACTCAATGCTCTCTCGCGTTCCTCCTCTTCCTCTTAACAACAACAAACATACTAAGACTACCTCCCGCCGTCGCCTTTCTTTCATCGGGTTAATTAGGAAAAGTATGTCGAACTATGAAAGTTTTAACTATGAAGCTGACGAGGACAGTGACGAGGAGGATGATAATGATAATGAAGAAGGAGATTATGACGACTGTAATGTGAGGGAAAAGAGAAAGGGGTTTGATCTTGCTACCACACTCGAACGCATTGAGAAGAACTTCGTCATTACTGATCCAAGGCTACCTGATAACCCTATAATCTTTGCATCTGATAGCTTCTTGGAACTTACAGAGTATAGTAGAGAAGAGATCTTGGGAAGAAATTGCAGATTTCTGCAAGGACCTGAAACTGATCGAGCTACAGTGAGAAAAATTAGAGAGGCTATTGACAACCAAATAGAAATTACTGTGCAGCTCATTAATTATACAAAGAGTGGTAAGAAGTTTTGGAATTTGTTTCATTTGCAACCTATGCGAGATCAGAAGGGAGAAGTTCAGTATTTTATTGGTGTTCAACTTGATGGTAGCCAACAATTGGAGCCTCTTCACAACTGCATTGCAGATGATACTGCCAAAGAGGGACAATTATTGGTAAAACAAACTGCTGAAAATGTTGATGATGCTGTTAGAGAACTTCCAGATGCTAATATGAAACCAGAAGATCTATGGATGAACCATTCAAAAGTTGTTCACCCTAAACCTCATAGAAAAGATGCTGCTGCTTGGGCAGCTATTCAAAAGATTCTGGATAGTGGAGAACAGATAGAGTTGAAGCATTTTAGGCCAATAAAACCTTTGGGAGCAGGAGATACTGGCAGTGTGTATTTGGTGGAGCTATGTGGAAGTGGACAATACTTTGCAATGAAGGCAATGCAGAAAGATGTGATGATGAATCGAAACAAGGTGCATAGAGCTTCCACTGAGAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACTCAAACCCATGTTTGTTTGATAACTGATTACTGCCCTGGTGGTGAATTATTCCTACTTCTTGATCGCCAGCCATCTAAGGTTCTCAAGGAAGATGCTGTCAGATTTTATGCTGCTGAGGTAGTGGTTGCATTGGAGTACCTTCATTGTCAAGGAATAATTTACCGAGATTTGAAGCCAGAGAATGTGTTACTTCAGAGCAATGGACATGTTTCTCTAACAGATTTTGATTTATCATGTTTAACATCCAGCAAACCACAGCTTATAACTCCAACTACAAATGAAAAGAAGAAACATCAAAAAGGTCCAGAAGCTCCAATATTTTTGGCAGAACCTATAAGAGAATCAAATTCTTTTGTTGGCACAGAAGAGTATATAGCTCCGGAAATTGTAACTGGTGCAGGCCATACTAGTGCTGTTGATTGGTGGGCTCTAGGAATTCTTTTATATGAAATGCTTTATGGATTTACGCCATTCAGAGGAAAGAATAGGCAAAAAACATTTACAAATATTCTCAATAAGGATCTTAAGTTTCCCAAAAGTAAACAGGTAAGTCTACATGCAAAGCATTTAATATATGGATTGTTACAAAAAGATCCAAAAAGCAGAATGGGTTCACAAGGAGGAGCTAATGAAATTAAGACACACTCATTCTTTCGTGGTGTCAATTGGGCCCTCGTCAGATGCATGAATCCTCCTACACTTGATGCTCCTCTATTTGAGAAAACTGAGGAAGAAGAAGAAGAGCAAGTAAAAGATGTAAATTCAGACATAGAAGAAATAAATATCTTTTAG 2826 0.425 MEEKTSSSPSNRTTSFRGDPSGTLQVLSNPSSNEKPPQISSPLRSQASKSAPSEASIPSEAAAQRAAEWGLVLKTDEETGKPRGVAPRTSGGEVGGGASSSSSSSREVRVARGVPRVSEDVRAALSTFQQTFVVSDAMKADYPILYASAGFFKMNGYTSKEVIGRNCRFLQGADTDPADVAKIREALNMGTSYCGRLLNYKKDGTPFWNLLTISPIKDHDGNVLKFIGMLVEVSKHTEGSKENMLRPNGLPESLIRYAAREKEKAGNSARELVEAMKMKMKRLSESNTNSNESNNNNKKKNNKAAPPRSSLLRRKSDSSIITSSTRKSLSEHSRSNSMLSRVPPLPLNNNKHTKTTSRRRLSFIGLIRKSMSNYESFNYEADEDSDEEDDNDNEEGDYDDCNVREKRKGFDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVRKIREAIDNQIEITVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQQLEPLHNCIADDTAKEGQLLVKQTAENVDDAVRELPDANMKPEDLWMNHSKVVHPKPHRKDAAAWAAIQKILDSGEQIELKHFRPIKPLGAGDTGSVYLVELCGSGQYFAMKAMQKDVMMNRNKVHRASTEREILDMLDHPFLPALYASFQTQTHVCLITDYCPGGELFLLLDRQPSKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSKPQLITPTTNEKKKHQKGPEAPIFLAEPIRESNSFVGTEEYIAPEIVTGAGHTSAVDWWALGILLYEMLYGFTPFRGKNRQKTFTNILNKDLKFPKSKQVSLHAKHLIYGLLQKDPKSRMGSQGGANEIKTHSFFRGVNWALVRCMNPPTLDAPLFEKTEEEEEEQVKDVNSDIEEINIF 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00275 941 MobiDBLite consensus disorder prediction 379 398 - -
Arst3g00275 941 ProSiteProfiles PAC domain profile. 191 245 IPR000700 -
Arst3g00275 941 MobiDBLite consensus disorder prediction 94 108 - -
Arst3g00275 941 Gene3D PAS domain 131 299 - -
Arst3g00275 941 SUPERFAMILY Protein kinase-like (PK-like) 595 916 IPR011009 -
Arst3g00275 941 CDD PAS 144 233 IPR000014 -
Arst3g00275 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Arst3g00275 941 Gene3D PAS domain 398 561 - -
Arst3g00275 941 Pfam Protein kinase domain 611 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00275 941 SMART pas_2 119 188 IPR000014 -
Arst3g00275 941 SMART pas_2 410 479 IPR000014 -
Arst3g00275 941 MobiDBLite consensus disorder prediction 7 57 - -
Arst3g00275 941 SUPERFAMILY PYP-like sensor domain (PAS domain) 424 523 IPR035965 -
Arst3g00275 941 SUPERFAMILY PYP-like sensor domain (PAS domain) 140 230 IPR035965 -
Arst3g00275 941 ProSiteProfiles Protein kinase domain profile. 609 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00275 941 NCBIfam PAS domain S-box protein 433 523 IPR000014 -
Arst3g00275 941 NCBIfam PAS domain S-box protein 143 238 IPR000014 -
Arst3g00275 941 FunFam LOV domain-containing protein 398 561 - -
Arst3g00275 941 FunFam LOV domain-containing protein 608 692 - -
Arst3g00275 941 CDD STKc_phototropin_like 607 915 - -
Arst3g00275 941 FunFam Putative LOV domain-containing protein 131 288 - -
Arst3g00275 941 Pfam PAS domain 431 523 IPR000014 -
Arst3g00275 941 Pfam PAS domain 140 234 IPR000014 -
Arst3g00275 941 MobiDBLite consensus disorder prediction 379 401 - -
Arst3g00275 941 Gene3D Transferase(Phosphotransferase) domain 1 693 910 - -
Arst3g00275 941 ProSiteProfiles PAS repeat profile. 412 481 IPR000014 -
Arst3g00275 941 PANTHER FLIPPASE KINASE 1-RELATED 277 921 - -
Arst3g00275 941 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Arst3g00275 941 FunFam Putative LOV domain-containing protein 693 908 - -
Arst3g00275 941 SMART pac_2 485 527 IPR001610 -
Arst3g00275 941 SMART pac_2 194 236 IPR001610 -
Arst3g00275 941 MobiDBLite consensus disorder prediction 312 352 - -
Arst3g00275 941 ProSitePatterns Protein kinases ATP-binding region signature. 615 638 IPR017441 GO:0005524
Arst3g00275 941 MobiDBLite consensus disorder prediction 283 359 - -
Arst3g00275 941 MobiDBLite consensus disorder prediction 1 110 - -
Arst3g00275 941 Gene3D Phosphorylase Kinase; domain 1 608 692 - -
Arst3g00275 941 SMART serkin_6 609 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00275 941 CDD PAS 423 523 IPR000014 -
Arst3g00275 941 ProSiteProfiles PAC domain profile. 482 536 IPR000700 -
Arst3g00275 941 MobiDBLite consensus disorder prediction 283 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00275 Arst-Chr3 2039943 2049274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00275 61 941 AGC Kinase Gene Family AT3G45780 66.298 0.0 1181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Arst3g00275 Pkinase 1.2e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01781 8 26166631 26174858 Arst3g00275 3 2039943 2049274 PCT