Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00271 ATGTTGGGAAAAGAGGTCTGGCAGAACAAAAATAAGTTTTTTGACAATAAGAGGCTCAATAATGGAGTAGTTAATGGAGAGCTGGGTTCTGGGTCATCAAATGATGATAACACAAGATTTAACAGGCAAACCAGGGATGGAAACAATGGGTTGCGGGGGCAAATTCAAGTCCATGACAGCATGCAGATTTCGCAACAACCACCTCAAGGACCAGTTATATGCTGGGAGAGATTTCTCCCTATAAGATCCATAAAAGTTCTGCTGGTGGAAGATGATGATTCAACACGCCATGTTGTCCGAGCTCTTTTACGAAATTGTAGTTATGAAGTCACTGCGGTGTCCAATGGTCTTCAAGCATGGAAAATCCTGGAAGATCCAGGAAATCACATTGATCTTGTCCTTACAGAGGTAGCTATACCGATTTTATCTGGAATAGGTCTTTTGTGCAAGATCATGAACCACAAAACACTGAAAAATATTCCCGTGATTATGATGTCATCTCAAGATTCTATGGGCATAGCGTTTAAGTGTTTGTCAAAAGGTGCAGTTGACTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAGAAACCTCTGGCAGCACGTTTGGAGAAGATGCCACAGTTCTAGTGGTAGTGGGAGCGAAAGTGGGACACATAACAGAAAATCTGCCAAGACAAGAAGTAACGATGCCTCAGAAAATAATAGTGACAGCAGTGATGAGAATGATTGTGGAAGTAGAGGCTTGACTGTTCGAGATGGAAGTGACAATGGAAGTGGCACTCAGAGTTCATGGACCAAGTGTCTAGTTCAAGTTGGCAGTTCTCATCCAGTTTCACCTCATAAGCAATTGATTGATGCCCCTGATAGCACGTGTGCCGAAGTGATGCATACAAAGCCTGAAAAAGCTAGTAGTAGGTGGATGCATGCAACAGAAAAAGAGTGCCATGAACTGGTTGACTATCTTGATAATGTTGCAATGGGTAAAGATTTAGCTATGGGAATAACTTTGAATGTGCAACTAGAGCATGCACCCAAGGAGTTGTCTAGCAATCCTTCGGGTAAAGGGATAAATATTATGTCTGATGTAGATGGTAAGCAACTCAATAAGGGACATAGTAATGTCTGTGAAAAAGGACAACTGGATTTCAACAGTGATAAAAACAGGCCTCGGGAAAATCAGGCTATGAATGTTGTTGATGTTACTGATAGCAGCAGTCCGCAGGCTGAAAGCAGAGACTTGAATACTCCAAATGGATTTTCCGGTTTCTCACAAACTAAAGCAAGTTGTTCCTTTAAACAGCATCCTTCCCTTGAACTGACTTTGAAAAGACTTGGAGAAGCAAGAGATACTAAAATTGTCACAAGTGATGAATGCAATATTTTGAGACATTCAGATCTGTCGGCATTCTCAAAATATAATACTGCTTCTTCTGCTAACCAGGCTCAAACTGGAAACGTTGGAAGCTGTTCACCACTTGACAATAGCTTAGCTGCACCAAATGCAGAGACATTACACAACTTTCCATCTCATTCAAACAGCACTCCTCCAAATCAGCAGTCTAATGGGAGCAACAACACCAATGACATGGCCTCCACTAATGCATGTCTTGGGACCAAACCTGAAACTTTGGACAAAAAGCCAGAATCTGCAAGAGGGATTGGCTCTTTTAATTCTTCCGCATTGCAAACTGTGCAGCACAATAGTATCACTTCATCTCAAAAGAAAATTTCTGCCCAAGGAGAATATGCAGAAATTGTTAAAGGACAAGTGGAATGCTCTGAACAAGGATTACAACTCCAGCAAAATCACTATCAAATTCATCATTACAATCACATCGCTCACAAAGCTGCTCTAGATCTCCGGTCAGGTCATGATGATCCCTCAATGAAAGGCTCCTCCAAGGCTGCCCAGCAATGTGTATCATCAAATGTCTTTGGTGGGCCAGCAGAAAGTAATGCTGCAAATTTTGGCATAGATGGAAATGCGGTTGAGAGTGATCATGGGAGCAATGGACAGGATGCATGCAGTAACACCTTGACAGTTAGAACTATGAATGTGGAAAACGGTCATGTAGCAAGTGGGAGCAATGGAGGATGTTGCAATGATAGGAAAAACATTGGGAATGGTGCAGATGAAGAAAGAATGGCGTTGAGAGAGGCTGCCTTGACAAAATTTCGTCAGAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTTCGATACCACAGCCGGAAAAAGCTAGCCGAACAGCGGCCACGAATCCGTGGACAATTTGTTCGACGGATAGCGTCTGACCCCAAAGAAGAAAAAGATATAGAAAGCAACAACATGGATTCAAGCGATGCTCTCCAATGA 2355 0.4217 MLGKEVWQNKIXKFFDNKRLNNGVVNGELGSGSSNDDNTRFNRQTRDGNNGLRGQIQVHDSMQISQQPPQGPVICWERFLPIRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKILEDPGNHIDLVLTEVAIPILSGIGLLCKIMNHKTLKNIPVIMMSSQDSMGIAFKCLSKGAVDFLVKPIRRNELRNLWQHVWRRCHSSSGSGSESGTHNRKSAKTRSNDASENNSDSSDENDCGSRGLTVRDGSDNGSGTQSSWTKCLVQVGSSHPVSPHKQLIDAPDSTCAEVMHTKPEKASSRWMHATEKECHELVDYLDNVAMGKDLAMGITLNVQLEHAPKELSSNPSGKGINIMSDVDGKQLNKGHSNVCEKGQLDFNSDKNRPRENQAMNVVDVTDSSSPQAESRDLNTPNGFSGFSQTKASCSFKQHPSLELTLKRLGEARDTKIVTSDECNILRHSDLSAFSKYNTASSANQAQTGNVGSCSPLDNSLAAPNAETLHNFPSHSNSTPPNQQSNGSNNTNDMASTNACLGTKPETLDKKPESARGIGSFNSSALQTVQHNSITSSQKKISAQGEYAEIVKGQVECSEQGLQLQQNHYQIHHYNHIAHKAALDLRSGHDDPSMKGSSKAAQQCVSSNVFGGPAESNAANFGIDGNAVESDHGSNGQDACSNTLTVRTMNVENGHVASGSNGGCCNDRKNIGNGADEERMALREAALTKFRQKRKERCFEKKVRYHSRKKLAEQRPRIRGQFVRRIASDPKEEKDIESNNMDSSDALQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00271 785 Gene3D - 84 256 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 391 422 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 230 246 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 482 556 - -
Arst3g00271 785 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Arst3g00271 785 ProSiteProfiles CCT domain profile. 720 762 IPR010402 GO:0005515
Arst3g00271 785 MobiDBLite consensus disorder prediction 347 422 - -
Arst3g00271 785 PANTHER TWO-COMPONENT RESPONSE REGULATOR 86 370 IPR045279 GO:0009736
Arst3g00271 785 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Arst3g00271 785 MobiDBLite consensus disorder prediction 482 540 - -
Arst3g00271 785 SUPERFAMILY CheY-like 83 209 IPR011006 -
Arst3g00271 785 MobiDBLite consensus disorder prediction 751 777 - -
Arst3g00271 785 FunFam Two-component response regulator-like PRR37 85 243 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 210 265 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 747 785 - -
Arst3g00271 785 Pfam CCT motif 720 761 IPR010402 GO:0005515
Arst3g00271 785 SMART REC_2 85 200 IPR001789 GO:0000160
Arst3g00271 785 CDD psREC_PRR 87 190 - -
Arst3g00271 785 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00271 Arst-Chr3 2008074 2016102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00271 32 290 Response Regulator Gene Family AT5G60100 62.264 1.89e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Arst3g00271 Response_reg 1.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00271 K12129 - gmx:100785796 995.342