Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00268 ATGTTCGATCTTAATCTAAATGCGGATTGCGACGATTCGACTCAGAACGGTGACTCGGAAGTTGTGATGCTGTGCGAGAAGCTTCCAGAAGGTTCCTGGAACCAAATGACGGAGTCGACCGGGACATCGAACTCCTCCGTCGTCAATGCCGACGGTTCGAGCAACAACGACGACTCGTCGTGCTCAACGCGCGTCACCGACAACGCGCTCACTTTCAATTTCGGAATCCTGAAAGCGGACGACAACGGCGTCGTGACGAAGGAGCTGTTTCCGGTGAACGGAGGAGCGAACTTCGTTGATTCCGTGAACTGGCAGAAGAGTAAGTTTCAAGGAACGAACGGCTCGATTGATCTCTCGTTCAATCGGCAGGGAGTGGTGGACGGTGAGGTAAAGGTGGTTCAGGTTCAACAACCGGCGAAGAAGAGTAGAAGAGGACCAAGGTCTCGGAGCTCGCAGTACAGAGGCGTCACCTTCTATAGAAGAACAGGACGATGGGAATCGCATATCTGGGATTGCGGTAAACAAGTTTATTTGGGCGGATTCGACACTGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATTAAGTTCAGAGGAGTTGAAGCTGATATCAATTTCAATCTGAGTGATTACGAGGACGATCTTAAACAGACGAAGAATCTATCCAAGGAGGAATTCGTGCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGGGGGAGTTCAAAGTACCGAGGAGTGACACTCCACAAGTGTGGCCGTTGGGAGGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCTGCTATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTACATATGAAGGAGAGATGAAATCTCCAGCCATCAATGAAGGTGGCAGTCCTAATCTTGAACTTAATTTGGGCATAGCAACTCCAGGACATGGTCTGAAAGAAAACAGGGGGCAACTCCAGTTCCCCTGGGTCCCTTACAGCATGCATGCTGGAAGAACAATGGTGGAAACCAATGTTAATTCGGTAATTGGTAATCCATCTTCAGAAAGGCTGGTTGCAACTGAAGAGCATCCTTCTCGGTGGAATGGCGTGAATCCTAGTTTCTTTCCCAATCAGGAGAGAGCTGATAGGATCAGCATAGATCATTCCAAAGGACTCCCCGGTTGGCCATGGCAAATGCACAACCAAATCACTGCTACCCCAGTGCCTCCTTTCTCTGTTGCAGCATCATCAGGATTCTCCATCTCAGCTACATTTCCATCGAACGCCATCTTTCCGGCAAAATCCATGAACTCAACTCCCCAAAGTCTTTGTTTTCCTTCATCTGCCGCTCCTATCAGCACTGCAACTCAATATTACTACCAGGCTAAGCCCCGGCAGGCACCACCCTAG 1461 0.4921 MFDLNLNADCDDSTQNGDSEVVMLCEKLPEGSWNQMTESTGTSNSSVVNADGSSNNDDSSCSTRVTDNALTFNFGILKADDNGVVTKELFPVNGGANFVDSVNWQKSKFQGTNGSIDLSFNRQGVVDGEVKVVQVQQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEDDLKQTKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMKSPAINEGGSPNLELNLGIATPGHGLKENRGQLQFPWVPYSMHAGRTMVETNVNSVIGNPSSERLVATEEHPSRWNGVNPSFFPNQERADRISIDHSKGLPGWPWQMHNQITATPVPPFSVAASSGFSISATFPSNAIFPAKSMNSTPQSLCFPSSAAPISTATQYYYQAKPRQAPP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00268 486 SUPERFAMILY DNA-binding domain 243 302 IPR016177 GO:0003677
Arst3g00268 486 FunFam AP2-like ethylene-responsive transcription factor 243 303 - -
Arst3g00268 486 CDD AP2 243 303 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 FunFam AP2-like ethylene-responsive transcription factor 151 210 - -
Arst3g00268 486 Gene3D AP2/ERF domain 243 302 IPR036955 GO:0003700|GO:0006355
Arst3g00268 486 Gene3D AP2/ERF domain 151 209 IPR036955 GO:0003700|GO:0006355
Arst3g00268 486 PRINTS Ethylene responsive element binding protein signature 283 303 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 PRINTS Ethylene responsive element binding protein signature 245 256 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 ProSiteProfiles AP2/ERF domain profile. 244 301 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 ProSiteProfiles AP2/ERF domain profile. 152 208 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 SMART rav1_2 244 307 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 SMART rav1_2 152 214 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 SUPERFAMILY DNA-binding domain 151 209 IPR016177 GO:0003677
Arst3g00268 486 Pfam AP2 domain 243 293 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 Pfam AP2 domain 152 200 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 CDD AP2 152 210 IPR001471 GO:0003700|GO:0006355
Arst3g00268 486 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 103 329 - -
Arst3g00268 486 MobiDBLite consensus disorder prediction 33 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00268 Arst-Chr3 1962654 1966461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00268 81 327 AP2-EREBP Transcription Factor Family AT4G36920 69.412 4.70e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst3g00268 AP2 2.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00268 K09284 - gmx:100788303 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01798 8 26373447 26377651 Arst3g00268 3 1962654 1966461 PCT