Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00248 ATGGAGGGAAGTGACACTAACAACACCACCTACTCTAACTCTACTTCTACTTCTTCTGGTGATCCTCCTCCTCCGGCGGCGGCAACGGTGGCGGTTGTAATGAGCCCTTGTGCAGCATGCAAGATCTTGAGGCGAAGATGCACGGAGAAATGCATGCTTGCGCCATATTTCCCTCCCACCGAGCCTACCAAGTTCACCATTGCTCATAGGGTCTTTGGCGCTAGCAACATCGTCAAGTTCTTGCAGATTCCGGAATCTCAAAGAGCTGATGCAGTGAGTAGCATGGTGTATGAGGCAAGTGCAAGAATAAGGGACCCAGTTTATGGTTGTGCAGGTGCAATTTGCCAGCTTCAGAAGCAAGTCAATGAGCTTAGAGCACAATTGGCAAAAACACAAGCTGAGGTTGCAACCATGCAATTTCAACAAGCCAACCTTGTTGCCCTAATTTACATGGAAATGGCACAACAACAAAGTTCCCAACAACAACAACAAGAGTTTGAATCATCACCTCAGCAATCATCAATGGAAGATTTCAATGTTCCAAGCCCTCACTATCAACAAAGTAACATCAACTACTTTGAGGATAACCCTAGCCTCAATTCATTGTGGGAGCCGCTCTGGACATGA 627 0.4673 MEGSDTNNTTYSNSTSTSSGDPPPPAAATVAVVMSPCAACKILRRRCTEKCMLAPYFPPTEPTKFTIAHRVFGASNIVKFLQIPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELRAQLAKTQAEVATMQFQQANLVALIYMEMAQQQSSQQQQQEFESSPQQSSMEDFNVPSPHYQQSNINYFEDNPSLNSLWEPLWT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00248 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 173 - -
Arst3g00248 208 MobiDBLite consensus disorder prediction 159 181 - -
Arst3g00248 208 Coils Coil 114 141 - -
Arst3g00248 208 MobiDBLite consensus disorder prediction 1 23 - -
Arst3g00248 208 Pfam Lateral organ boundaries (LOB) domain 36 132 IPR004883 -
Arst3g00248 208 MobiDBLite consensus disorder prediction 1 25 - -
Arst3g00248 208 ProSiteProfiles LOB domain profile. 35 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00248 Arst-Chr3 1805671 1807878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00248 32 208 AS2 family AT1G07900 61.326 4.84e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst3g00248 LOB 6.4e-39 No_clan