Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00237 ATGGACATTGATCTAAACCATGCAGTAGTAGTGAGTAGTGAGGATGATGATGAGAGCAATGTGGAATGTGACAAAGGTGCTTCATCACCTTCTCCTTCAGGTTCTGCTATGTCTTCTTACCTTGAACTTTGGCATGCTTGTGCTGGACCTCTAACTTCACTCCCAAAGAAAGGGAATGTGGTTGTGTACTTCCCTCAAGGACACTTAGAACAAGCCTCTTCTTTCTCTCATTTCGCACCAATTGATGTGCCTAATTATGATCTTCAGCCTCAAATCCTTTGCAGGGTTGTTAATGTTCAGTTACTTGCTAATAAGGAGAATGATGAGGTTTATACTCAGATTACTTTGCTTCCCCAATCTGATGAGTTGGAAGATAAGAATTTGGAGGGTAAAGAGGTTGAGGAAATTGGAGGAGATGAAGAGGGAAATGGAGTTCCAACCTTAAAGCCAACAACTCATATGTTCTGCAAATCACTCACTGCTTCAGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGCCGAGCTGCCGAAGATTGTTTTCCTCCTTTGGATTATAAACAACAAAGACCCTCTCAAGAGCTTGTAGCAAAAGACCTTCATGGTGTGGAGTGGAGATTTCGCCATATTTATAGAGGGCAACCAAGGAGGCATTTACTCACTACTGGTTGGAGTATGTTTGTTGGCCAAAAGAAACTTGTTTCTGGTGATGCAGTCCTTTTTCTAAGGGGTGAAAATGGAGAACTGAGATTGGGAATCAGAAGAGCTATTAGACCAAGAAATGGTCTTCCTGGAACAGTAATTGGAAACCAAAACTGTTATCCCAATTTTCTTTCTTCTGTTTCTGATGCAATATCCACCAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCACCCTTTGTTGTGCCATATAAAAAATATGTTAAAAGCATCAACAATCCTGTGACAATTGGGACAAGATTCAAAATGACTTTTGAAATGGATGAATCTCCAGAAAGAAGGTGTGGTGGTGGTACTGTGATTGGAATGAGTGAAGTAGATCCATATAGATGGCCTAAATCAAAGTGGAGATGCTTGATGGTTAGATGGGATGAGGATATTGATACTAATCATCAAGACCGAGTATCTCCATGGGAGATCGATCCTTTCGCTTCCCTCCCTCCTTTGAGTCTTCAGTCTTTCCCAAGACTGAAGAAACTAAGGACGGATGGGCAAGCTGCCGCTCACAGTCACCTCATCACTGGGAGCAGTGGATTGGTGGACTTTGAGGAGTCTGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATGCTGGTTTTCTGTCACTCTATTATGGATGTGACACCTTAACTAACCGGCCGCGATTTGAGATGAGCCCTCTTCCACACGTAGCATCAACAACTGGAGTGAGAAGGGGCAACACTGCTGAGCTTATGAGTGTTCATCCATTCAGCTATGCAGGCTTCACAGAAACTACTAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATAGGTCCATTGAAATCCCTTAGGGGAAAAGTTGATTTGAGCCTTGGTTCTTGGGGCAAATCCAACAATAGTATTGGTTGCACCACTTTCAACTTTCATCAAGCAACCAAACCACAAGTTCTTGAATCTTCTTATTTTCCCTATGGGGATATTCACAAGAAAACTGCTCAAACCAACATGTTTTACTCGAAACCGACGAATTTCCACAGAGAGAATGTCTCCTTCAACACACATTCCAATCAAGGGGTGATCAAGAGAAGTGAAGTTGGAAGAACAGATGTTCCAAATGAGCATAAGAAGACAATGCCGGGCGAAACTTGTGCGCCGGATATGAAGATTCCAGATGACAGCAAAAATGTTAAGGCAAAGGTAAATGGCTGCAAACTATTTGGATTTCCTTTGTCTGGGGAAACTACCCCTCAAAATTTACAGAACACTGCAAAAAGGAGTTGTACTAAGGTTCACAAGCAAGGAAGCCTAGTAGGAAGAGCCATTGATCTATCAAGATTGAGCAGCTATGCTGACCTGCTGAGTGAACTCGAGAGACTTTTCGGCATGGAAGGCCTTCTTAGAGATCCTGATAAGGGATGGAGGATCCTCTACACTGATAATGAGAATGATATAATGGTTGTTGGGGATGATCCATGGCATGAGTTTTGCAATGTGGTGTGCAAGATCCATATACATTCCCAAGAAGAAGTGGAGAAGATGACAATTGGGATAATCAATGATGAAACAAATAGCAGTTTGGAAGAGGCACCAATGATTATGGAGCCTTCAAAGTCCTCCTCAGTGGGTCAACCAGATTATTATTCTCCAACAGTTCTCAAAGTCTAA 2358 0.4241 MDIDLNHAVVVSSEDDDESNVECDKGASSPSPSGSAMSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQASSFSHFAPIDVPNYDLQPQILCRVVNVQLLANKENDEVYTQITLLPQSDELEDKNLEGKEVEEIGGDEEGNGVPTLKPTTHMFCKSLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSMFVGQKKLVSGDAVLFLRGENGELRLGIRRAIRPRNGLPGTVIGNQNCYPNFLSSVSDAISTKSMFHVFYSPRASHAPFVVPYKKYVKSINNPVTIGTRFKMTFEMDESPERRCGGGTVIGMSEVDPYRWPKSKWRCLMVRWDEDIDTNHQDRVSPWEIDPFASLPPLSLQSFPRLKKLRTDGQAAAHSHLITGSSGLVDFEESVRSPKVLQGQENAGFLSLYYGCDTLTNRPRFEMSPLPHVASTTGVRRGNTAELMSVHPFSYAGFTETTRFPRVLQGQEIGPLKSLRGKVDLSLGSWGKSNNSIGCTTFNFHQATKPQVLESSYFPYGDIHKKTAQTNMFYSKPTNFHRENVSFNTHSNQGVIKRSEVGRTDVPNEHKKTMPGETCAPDMKIPDDSKNVKAKVNGCKLFGFPLSGETTPQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYADLLSELERLFGMEGLLRDPDKGWRILYTDNENDIMVVGDDPWHEFCNVVCKIHIHSQEEVEKMTIGIINDETNSSLEEAPMIMEPSKSSSVGQPDYYSPTVLKV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00237 785 Gene3D - 319 391 - -
Arst3g00237 785 FunFam Auxin response factor 651 745 - -
Arst3g00237 785 FunFam Auxin response factor 153 257 - -
Arst3g00237 785 ProSiteProfiles PB1 domain profile. 656 738 IPR000270 GO:0005515
Arst3g00237 785 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
Arst3g00237 785 SUPERFAMILY DNA-binding pseudobarrel domain 148 267 IPR015300 -
Arst3g00237 785 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Arst3g00237 785 SUPERFAMILY CAD & PB1 domains 659 735 - -
Arst3g00237 785 CDD B3_DNA 153 255 IPR003340 GO:0003677
Arst3g00237 785 Gene3D - 152 257 IPR015300 -
Arst3g00237 785 FunFam Auxin response factor 318 391 - -
Arst3g00237 785 Pfam Auxin response factor 282 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g00237 785 SMART B3_2 155 257 IPR003340 GO:0003677
Arst3g00237 785 Gene3D - 652 745 - -
Arst3g00237 785 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 40 745 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g00237 785 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00237 Arst-Chr3 1653070 1657749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00237 34 768 B3 DNA Binding Superfamily AT5G60450 57.831 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g00237 B3 1.1e-20 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01825 8 26662469 26667037 Arst3g00237 3 1653070 1657749 PCT