Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00236 ATGGACATTGATCTAAACCATGCAGTAGTAGTGAGTAGTGAGGATGATGATGAGAGCAATGTGGAATGTGACAAAGGTGCTTCATCACCTTCTCCTTCAGGTTCTGCTATGTCTTCTTACCTTGAACTTTGGCATGCTTGTGCTGGACCTCTAACTTCACTCCCAAAGAAAGGGAATGTGGTTGTGTACTTCCCTCAAGGACACTTAGAACAAGCCTCTTCTTTCTCTCATTTCGCACCAATTGATGTGCCTAATTATGATCTTCAGCCTCAAATCCTTTGCAGGGTTGTTAATGTTCAGTTACTTGCTAATAAGGAGAATGATGAGGTTTATACTCAGATTACTTTGCTTCCCCAATCTGATGAGTTGGAAGATAAGAATTTGGAGGGTAAAGAGGTTGAGGAAATTGGAGGAGATGAAGAGGGAAATGGAGTTCCAACCTTAAAGCCAACAACTCATATGTTCTGCAAATCACTCACTGCTTCAGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGCCGAGCTGCCGAAGATTGTTTTCCTCCTTTGGATTATAAACAACAAAGACCCTCTCAAGAGCTTGTAGCAAAAGACCTTCATGGTGTGGAGTGGAGATTTCGCCATATTTATAGAGGGCAACCAAGGAGGCATTTACTCACTACTGGTTGGAGTATGTTTGTTGGCCAAAAGAAACTTGTTTCTGGTGATGCAGTCCTTTTTCTAAGGGGTGAAAATGGAGAACTGAGATTGGGAATCAGAAGAGCTATTAGACCAAGAAATGGTCTTCCTGGAACAGTAATTGGAAACCAAAACTGTTATCCCAATTTTCTTTCTTCTGTTTCTGATGCAATATCCACCAAAAGCATGTTTCATGTTTTCTACAGTCCAAGAGCAAGTCATGCACCCTTTGTTGTGCCATATAAAAAATATGTTAAAAGCATCAACAATCCTGTGACAATTGGGACAAGATTCAAAATGACTTTTGAAATGGATGAATCTCCAGAAAGAAGGTGTGGTGGTGGTACTGTGATTGGAATGAGTGAAGTAGATCCATATAGATGGCCTAAATCAAAGTGGAGATGCTTGATGGTTAGATGGGATGAGGATATTGATACTAATCATCAAGACCGAGTATCTCCATGGGAGATCGATCCTTTCGCTTCCCTCCCTCCTTTGAGTCTTCAGTCTTTCCCAAGACTGAAGAAACTAAGGACGGATGGGCAAGCTGCCGCTCACAGTCACCTCATCACTGCAGGGAGCAGTGGATTGGTGGACTTTGAGGAGTCTGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATGCTGGTTTTCTGTCACTCTATTATGGATGTGACACCTTAACTAACCGGCCGCGATTTGAGATGAGCCCTCTTCCACACGTAGCATCAACAACTGGAGTGAGAAGGGGCAACACTGCTGAGCTTATGAGTGTTCATCCATTCAGCTATGCAGGCTTCACAGAAACTACTAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATAGGTCCATTGAAATCCCTTAGGGGAAAAGTTGATTTGAGCCTTGGTTCTTGGGGCAAATCCAACAATAGTATTGGTTGCACCACTTTCAACTTTCATCAAGCAACCAAACCACAAGTTCTTGAATCTTCTTATTTTCCCTATGGGGATATTCACAAGAAAACTGCTCAAACCAACATGTTTTACTCGAAACCGACGAATTTCCACAGAGAGAATGTCTCCTTCAACACACATTCCAATCAAGGGGTGATCAAGAGAAGTGAAGTTGGAAGAACAGATGTTCCAAATGAGCATAAGAAGACAATGCCGGGCGAAACTTGTGCGCCGGATATGAAGATTCCAGATGACAGCAAAAATGTTAAGGCAAAGGTTCACAAGCAAGGAAGCCTAGTAGGAAGAGCCATTGATCTATCAAGATTGAGCAGCTATGCTGACCTGCTGAGTGAACTCGAGAGACTTTTCGGCATGGAAGGCCTTCTTAGAGATCCTGATAAGGGATGGAGGATCCTCTACACTGATAATGAGAATGATATAATGGTTGTTGGGGATGATCCATGGCATGAGTTTTGCAATGTGGTGTGCAAGATCCATATACATTCCCAAGAAGAAGTGGAGAAGATGACAATTGGGATAATCAATGATGAAACAAATAGCAGTTTGGAAGAGGCACCAATGATTATGGAGCCTTCAAAGTCCTCCTCAGTGGGTCAACCAGATTATTATTCTCCAACAGTTCTCAAAGTCTAA 2271 0.4258 MDIDLNHAVVVSSEDDDESNVECDKGASSPSPSGSAMSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQASSFSHFAPIDVPNYDLQPQILCRVVNVQLLANKENDEVYTQITLLPQSDELEDKNLEGKEVEEIGGDEEGNGVPTLKPTTHMFCKSLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSMFVGQKKLVSGDAVLFLRGENGELRLGIRRAIRPRNGLPGTVIGNQNCYPNFLSSVSDAISTKSMFHVFYSPRASHAPFVVPYKKYVKSINNPVTIGTRFKMTFEMDESPERRCGGGTVIGMSEVDPYRWPKSKWRCLMVRWDEDIDTNHQDRVSPWEIDPFASLPPLSLQSFPRLKKLRTDGQAAAHSHLITAGSSGLVDFEESVRSPKVLQGQENAGFLSLYYGCDTLTNRPRFEMSPLPHVASTTGVRRGNTAELMSVHPFSYAGFTETTRFPRVLQGQEIGPLKSLRGKVDLSLGSWGKSNNSIGCTTFNFHQATKPQVLESSYFPYGDIHKKTAQTNMFYSKPTNFHRENVSFNTHSNQGVIKRSEVGRTDVPNEHKKTMPGETCAPDMKIPDDSKNVKAKVHKQGSLVGRAIDLSRLSSYADLLSELERLFGMEGLLRDPDKGWRILYTDNENDIMVVGDDPWHEFCNVVCKIHIHSQEEVEKMTIGIINDETNSSLEEAPMIMEPSKSSSVGQPDYYSPTVLKV 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00236 756 ProSiteProfiles PB1 domain profile. 627 709 IPR000270 GO:0005515
Arst3g00236 756 Gene3D - 624 716 - -
Arst3g00236 756 FunFam Auxin response factor 153 257 - -
Arst3g00236 756 SUPERFAMILY CAD & PB1 domains 624 706 - -
Arst3g00236 756 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
Arst3g00236 756 SUPERFAMILY DNA-binding pseudobarrel domain 148 267 IPR015300 -
Arst3g00236 756 CDD B3_DNA 153 255 IPR003340 GO:0003677
Arst3g00236 756 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Arst3g00236 756 Pfam Auxin response factor 282 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g00236 756 FunFam Auxin response factor 318 391 - -
Arst3g00236 756 Gene3D - 319 391 - -
Arst3g00236 756 SMART B3_2 155 257 IPR003340 GO:0003677
Arst3g00236 756 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 40 716 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g00236 756 Pfam AUX/IAA family 624 709 IPR033389 -
Arst3g00236 756 Gene3D - 152 257 IPR015300 -
Arst3g00236 756 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00236 Arst-Chr3 1653070 1657749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00236 34 739 B3 DNA Binding Superfamily AT5G60450 56.676 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g00236 B3 1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00236 - - gmx:100816621 1085.48