Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00213 ATGGCTAAAGATGTTGAAGTTGAAGAGCAGAGAGGAGGAGGAGGAGGAGAATACTCAGCAAAAGACTACCATGAACCACCACCAGCACCATTGATTGATGCAGAGGAGCTTACAAAGTGGTCCTTCTATAGAGCACTCATAGCTGAGTTTATAGCAACACTTTTATTCCTTTACATCACTGTGTTGACCATTATTGGTTATAGTAACCAAAGTGATACCACAATCAAGGGTAACACACAGTGTGATGGTGTTGGAATCTTGGGTATTGCTTGGGCTTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCCGGCATTTCCGGAGGACACATCAACCCTGCAGTTACATTTGGGTTGTTCCTTGGCCGGAAGGTGTCGCTGATAAGGGCACTGTTGTACATAGTAGCACAGTGTGCCGGCGCCATCTGCGGCACCGGATTGGCCAAGGGATTCCAGAAAGCTTACTTTGATAGGTATGGAGGTGGTGCCAACTACGTTCATCCTGGTTACAACAAAGGAACTGCTTTGGGTGCTGAGATTATTGGCACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGACCCTAAGAGAAACGCCAGAGACTCCCATGTTCCTGTGTTGGCACCACTGCCAATTGGATTTGCGGTGTTCATGGTTCACTTGGCCACAATTCCGGTGACCGGCACCGGCATCAACCCGGCAAGAAGCTTCGGAGCTGCCGTGATTTACAACAAAGACAAAATCTGGGATGACCATTGGATATTCTGGGTTGGACCAATTCTTGGAGCTGCAGCGGCTGCAATCTACCATGAACACATTATTAAAGCATCTGCCATAAAAGCCCTTGGATCCTTCAGGAGCAACCACTAA 876 0.4772 MAKDVEVEEQRGGGGGEYSAKDYHEPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTIIGYSNQSDTTIKGNTQCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYIVAQCAGAICGTGLAKGFQKAYFDRYGGGANYVHPGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNKDKIWDDHWIFWVGPILGAAAAAIYHEHIIKASAIKALGSFRSNH 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00213 291 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Arst3g00213 291 NCBIfam MIP family channel protein 48 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 FunFam Probable aquaporin PIP1-2 29 291 - -
Arst3g00213 291 Pfam Major intrinsic protein 36 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 Gene3D Glycerol uptake facilitator protein. 29 291 IPR023271 -
Arst3g00213 291 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 CDD MIP 44 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g00213 291 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 280 IPR034294 -
Arst3g00213 291 MobiDBLite consensus disorder prediction 1 25 - -
Arst3g00213 291 SUPERFAMILY Aquaporin-like 36 277 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00213 Arst-Chr3 1506990 1509165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00213 1 289 Major Intrinsic Protein MIP AT2G37170 77.163 9.29e-164 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00213 K09872 - gmx:100811119 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01853 8 26848947 26850858 Arst3g00213 3 1506990 1509165 PCT