Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00203 ATGAAGGAAGGTGAGAAGAGCTTGGATCCGCAGCTATGGCATGCGTGTGCAGGTTCCATGGTTCAGATGCCTCAAGTGAACTCGAAAGTGTTCTACTTTCCACAAGGGCATGCAGAACACGCTCAAACCGCCATTGATCTCTCAACTCCTTCTTTGAGGGTTCCACCACTCATCCCTTGCAGGGTTGCAACAGTGAGATTCATGGCTGACCCTGAAACAGATGAAGTTTTCGCAAAGATAAAGCTTGTTCCACTGAAAAGTTCAGAGCTTGATCAAAACGACAACACCTTGGAGGGTGAAGTTGTTGTGGAGAATCAAGAAAAGCCTGCATCTTTTGCAAAGACTTTGACCCAATCTGATGCTAACAATGGTGGGGGTTTCTCAGTCCCTCGTTACTGTGCAGAAACCATCTTCCCCCGGCTCGATTACTCGGCGGAGCCGCCGGTTCAGACGGTGGTGGCAAAGGATGTTCATGGTGAGCTATGGAAGTTTAGGCATATATATAGAGGTACACCAAGGAGGCACTTGCTTACAACTGGTTGGAGCACTTTTGTTAATCAGAAAAAGCTTGTAGCTGGTGATTCTGTGGTGTTTCTGAGGGCTGAAAATGGTGATCTTTGTGTTGGGATTAGGAGGGCAAAAAGGGGAATTGGAATTGGAATTGGTGGTGGTTGTGAGGGTTCATCTTTGTGGAGTTCAGCTTCTTCTGGTAATGGTAATAGTAATGGAGGGCCTTATGGAGCATTATCAATGTTCTTGAGAGAGGAGAACAACAAGCTTTTAAGGAATAGTAACGGAAGGTGTTCTTATTCTTCTTCTTCAAGGGTGAGAGCTGAAGATGTTGTGGAAGCTGTGTCAATGGCTGCAAGGAACCAAGCATTTGAGGTTGTGTATTCTCCAAGGGCAAGCACTCCTGAGTTCTGCATTAAGGCTTCTTCTGTGACTGATGCAATGAGGATCCAATGGTGTTCTGGCATGAGGTTCAAGATGCCCTTTGAGACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGGACTGTTGCTTCCGTTCAGGTTGCTGATCCTATCCGCTGGCCGAATTCGCCTTGGCGAATTCTTCAGGTTACTTGGGATGAGCCTGATTTGCTACAAAATGTGAAGAGAGTTAGTCCATGGTTGGTTGAATTGGTATCAAACATGCCAATCATCAATATCTCGCCATTCTCGCCACCAAGGAAGAAGTTGAGGTTTCCTCAGCACCCAGACTTCCCTCAGGACATTCAGTTCACATCATTACCAACGTTTCCGGGCAATTATATCGGGCCGAATAGCCCCATGTATTGTTTATCTGAAAACGCTCCCGCAAGCATACAGGGAACCAGGCATGCTCAAATTGGAATATCTCTTTCAGATTTCCACCTCAGCAATAAACTGCAGTTGGGGCTGCTTCCAACTAGTATCCATCGGCTCGATGTTCATAATCGCGACATGACCAACCATGATAAGAGCAAAGAGAGCTTATCATGCTTGCTCACCATGGGAAAATCCAACAAGAGTCTGGAGAGTTCTGATAACAATGTTAAGACACACCAGTTTTTGCTTTTTGGTCAGCCTATTCTCACTGAGCAACAAATCTCTCGAACCGGAAAAGACTCGCCGGACGAGACTAAGATCAAAGAGAAGTGCTTCTTAGGTGAAGCTAAATTTGCAGTTTCACAGCACATTCCACCAGGAAAAGCTTCTAATGCTGCCGAGTTTTCGTGGCAAATCGGCTTGGAAACTAGCCATTGCAAGGTTTTCTTGGAATCAGAAGATGTAGGAAGAACCTTAGACCTATCAAGCCTTGGTTCATATGAAGAACTCTATAGAAAACTGGCCAACATGTTTGATATGGAACGATCTGAGATCTTCAACCATGTTCTTTACCGCGACGAAACAAGTGCTGTTAAGAAAATTGGAGAAGAACCCTTCAGTGAATTCATGAAGACAGCAAAAAGATTGACAATTCTTATGGATTCAAGCAGCAAAAATATTACAAGGGCATGGATTACAGGGAGTCGCAGTGGTGAACATGGAATTGATGCATCAAACAAAACTGGTCCTCTTAGCATATTTGTTTAA 2100 0.4481 MKEGEKSLDPQLWHACAGSMVQMPQVNSKVFYFPQGHAEHAQTAIDLSTPSLRVPPLIPCRVATVRFMADPETDEVFAKIKLVPLKSSELDQNDNTLEGEVVVENQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVVAKDVHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKRGIGIGIGGGCEGSSLWSSASSGNGNSNGGPYGALSMFLREENNKLLRNSNGRCSYSSSSRVRAEDVVEAVSMAARNQAFEVVYSPRASTPEFCIKASSVTDAMRIQWCSGMRFKMPFETEDSSRISWFMGTVASVQVADPIRWPNSPWRILQVTWDEPDLLQNVKRVSPWLVELVSNMPIINISPFSPPRKKLRFPQHPDFPQDIQFTSLPTFPGNYIGPNSPMYCLSENAPASIQGTRHAQIGISLSDFHLSNKLQLGLLPTSIHRLDVHNRDMTNHDKSKESLSCLLTMGKSNKSLESSDNNVKTHQFLLFGQPILTEQQISRTGKDSPDETKIKEKCFLGEAKFAVSQHIPPGKASNAAEFSWQIGLETSHCKVFLESEDVGRTLDLSSLGSYEELYRKLANMFDMERSEIFNHVLYRDETSAVKKIGEEPFSEFMKTAKRLTILMDSSSKNITRAWITGSRSGEHGIDASNKTGPLSIFV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00203 699 Gene3D - 110 214 IPR015300 -
Arst3g00203 699 Gene3D - 321 394 - -
Arst3g00203 699 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
Arst3g00203 699 SMART B3_2 112 214 IPR003340 GO:0003677
Arst3g00203 699 SUPERFAMILY DNA-binding pseudobarrel domain 97 214 IPR015300 -
Arst3g00203 699 CDD B3_DNA 111 212 IPR003340 GO:0003677
Arst3g00203 699 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 668 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g00203 699 Pfam Auxin response factor 284 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g00203 699 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Arst3g00203 699 FunFam Auxin response factor 322 395 - -
Arst3g00203 699 FunFam Auxin response factor 110 214 - -
Arst3g00203 699 Gene3D - 585 672 - -
Arst3g00203 699 ProSiteProfiles PB1 domain profile. 587 670 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00203 Arst-Chr3 1409303 1412685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00203 3 673 B3 DNA Binding Superfamily AT2G28350 58.699 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g00203 B3 1.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00203 - - gmx:100814686 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01865 8 27002972 27006910 Arst3g00203 3 1409303 1412685 PCT