Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00189 ATGAGAATGGTGTTTGGGAATACAAGATGTGTGAGATTTCAAGATGATGCTGAACTAGCCAAAATCTCAACAACTAATGGTGACAATGGAATTAAGCTACTTAGTTCCAATAAAGATCACAACAATAGAGAAGCAAGAAAAGCAAGGAAGTTCTTGAAAGCCAGAGTATTATCAAGAGTTTTCTCAGAAGACTATGAGAGAGTAAGAAGAAGGATTTTAGACCCAAGAGGACAAACCATTCACAGATGGAACAAGATTTTCTTGATCATCATGAGGTATCGCACGGCTTATGTTGCGCCTTCTTCGCGTGTTTTCGGTAGAGGAGAGCTTGTTATAGACCCTGCAAAGATAGCAGCTAGGTACTTCTTCAAGGGTTTCTGGCTAGACTTTGTTGCCGCATTACCCCTTCCTCAAGTGCTGATCTGGATTGTGATCCCCAATCTTGGAGGCTCAACCATGGCGAACACAAAAAATGTCCTTCGATTCATCATCATTTTTCAATATATACCAAGGCTGTTTCTGATTTTTCCACTTTCATCCCAAATTGTAAAGGCTACTGGGGTTGTGACAGAGACAGCATGGGCTGGTGCTGCTTATAACCTCATGCTTTACATGCTGGCTAGCCATTTTTTTGGAGCTTGCTGGTACCTTCTATCAATTGAAAGACAAGAAGCATGCTGGAGGAGAGTCTGTGATATGAAAAATTCATCTTGTAAATATAGTTTCTTCGACTGCAACATGGTTAAAAATCCACTCAGGGACTCATGGTTTAAGGGAAGTAATGTCACAAAGTTATGTTCACCAGAAGCTAAGTTTTATCCCTTTGGCATATATGGTGATGCAGTCACATCAAGAGTTACAACCTCACCATTCTTTAAGAAGTACTTCTATTGCCTTTGGTGGGGTCTCAGGAATTTGAGTTCTTTAGGACAAAATCTACTCACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTCTGGTTGCAACCCTTGGATTGGTTCTTTTTGCATTACTCATTGGTAATATGCAGACATACCTTCAATCAACAACTGTGAGGCTAGAAGAGTGGAGGGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTTCCTCAAGAACTAAGACAATCCGTGCGCAAATACGATCAGTATAAATGGCTGGCGACTCGAGGAGTGGACGAAGAAGCCCTTCTCAAAGATCTTCCATTAGATCTTCGAAGAGACATCAAGCGCCATCTTTGTATCGAGCTGGTTCGACGAGTTCCATTGTTTGAACAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTAAAGCCTTCATTGTGCACAGAAAGCACATATCTTGTCCGAGAAGGCGATCCGGTCAACGAAATGCTCTTCATAATCAGAGGAAATCTTGATTCCTACACAACCAATGGCGGCCGGACCGGATTCTTCAACTCGTGCCGGATCGGCCCTGGCGATTTCTGCGGCGAGGAACTCCTAACTTGGGCCTTAGATCCAAAACCAAGTGTGATAATACTTCCTTGTTCCACAAGAACAGTTAAGGCCATATCAGAAGTTGAAGCATTTGCACTCATGGCAGAAGATTTGAAATTTGTTGCATCACAATTTAGAAGATTGCATAGCAAGCAACTTAGGCACAAGTTCAGGATTCACTCACACCAATGGAGAACTTGGGCTGCATGTTTCATACAAGCTGCATGGAGAAGGTTCAAGAAGAGAAAAGAAGCTGCTGAATTGAGGGCAAGAGAGGAAAATGAGGCTGAAACACATGCAACAAGGAGCAATAGGAAGGGTATGGATGTAAATTCAGGTGCAGATTCTGAAGTAGTAAGCTCTTTGCAGAAGCCAGCTGAACCAGACTTTTCTGTTGATGAGTGA 1899 0.4223 MRMVFGNTRCVRFQDDAELAKISTTNGDNGIKLLSSNKDHNNREARKARKFLKARVLSRVFSEDYERVRRRILDPRGQTIHRWNKIFLIIMRYRTAYVAPSSRVFGRGELVIDPAKIAARYFFKGFWLDFVAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYIPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHFFGACWYLLSIERQEACWRRVCDMKNSSCKYSFFDCNMVKNPLRDSWFKGSNVTKLCSPEAKFYPFGIYGDAVTSRVTTSPFFKKYFYCLWWGLRNLSSLGQNLLTSTFVGEIMFAILVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWLATRGVDEEALLKDLPLDLRRDIKRHLCIELVRRVPLFEQMDERMLDAICERLKPSLCTESTYLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPKPSVIILPCSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRIHSHQWRTWAACFIQAAWRRFKKRKEAAELRAREENEAETHATRSNRKGMDVNSGADSEVVSSLQKPAEPDFSVDE 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00189 632 SUPERFAMILY cAMP-binding domain-like 356 555 IPR018490 -
Arst3g00189 632 MobiDBLite consensus disorder prediction 587 632 - -
Arst3g00189 632 CDD CAP_ED 426 558 IPR000595 -
Arst3g00189 632 SMART cnmp_10 426 558 IPR000595 -
Arst3g00189 632 Gene3D Helix hairpin bin 353 417 - -
Arst3g00189 632 MobiDBLite consensus disorder prediction 603 617 - -
Arst3g00189 632 Pfam Ion transport protein 89 353 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst3g00189 632 FunFam Cyclic nucleotide-gated ion channel 1 353 417 - -
Arst3g00189 632 Gene3D - 86 350 - -
Arst3g00189 632 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 89 628 - -
Arst3g00189 632 SUPERFAMILY Voltage-gated potassium channels 116 348 - -
Arst3g00189 632 Gene3D Jelly Rolls 424 545 IPR014710 -
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 389 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 295 312 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 321 332 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 206 216 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 339 348 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 PRINTS EAG/ELK/ERG potassium channel family signature 89 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst3g00189 632 ProSiteProfiles cAMP/cGMP binding motif profile. 426 512 IPR000595 -
Arst3g00189 632 MobiDBLite consensus disorder prediction 587 602 - -
Arst3g00189 632 FunFam Cyclic nucleotide-gated ion channel 1 424 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00189 Arst-Chr3 1315140 1319094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00189 50 631 Ion Channels AT2G28260 71.115 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00189 K05391 - gmx:100791992 967.992