Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00179 ATGAAGCTCAAGCTCAGAGTTGCTCTTGCTATTGTCTTCGTCTTGCTCTCGATTCAGCACTCATTTTCTGATGAGCCTTCTGATACCTATGGCCTAAACAAGTGGAAATGTACATGTGCTTTCCAAGGGAACCAGAGCTACTCTATTGCAAATTGTTCCAAGTCATGTGATTGCCGTTCGGATGCTGAAGACACTTCATCTATATGGACATGCTTATGTAATCCCAATGGATTCCCCCAAATGGGAGTGGCATCAGCAAATGGCCACAACCATAATTGCTTCAGTGCCTGCAACTGTACCTGGGGAACTAACAGCTTGCCACTAGGTTCAAAGAAACACATCTCCAGCAAGACTGTTGTAGTTATTCTACTAATATGTGTTGTCTGTACGACCATTGCGTTTCTTACCTCGGTCCTATGCTATGTCTACCGAAGGGACAGATGTCCTATTCAAACACCGATATTTTCACCAGAAAAGGAAACAAGTAGCGGTAGCACTGCCAACTTAATTAGTCACAGGACAGTGACTTCTTCAGTGACAGAAACAAAATTTGCTATTGATTCTCCTGTTAGTAATATGACAGGATGCTTTCAGAAAGCCTCTTTCTTGTTTGGGATCCAGAGGGAAACTTTTCATGGAAACATTATTCAATTTTCCTTTGCCGAACTAGAAAATGCCACTGAAAACTTTCTAGGCTCCAACCTAATTGGACTAGGTGGAAGTAGTTATGTATACCGCGGTCGTCTGAAAGATGGTAGTATCGTAGCAGTTAAGCGACTAAAAGATCCAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAAGAGATTGAACTATTATCTAGACTTCATCATTGCCATTTGGTGCCTTTGCTTGGATACTGCTCAGAATTAAAAGGGAGACATTTTCAAAGGCTACTAGTATTCGAGTACATGTCTAATGGGAATTTGAGGGACTGGTTAGATGGAGTGTCTGCAAAAAATCTCGATTGGACCACACGCGTCACAATCGCAATCGGAGCTGCAAGGGGCTTGGAATATCTCCATGAAGCGGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAGATAACTGACCTTGGTATGGCTAAGAACGTGCGAGCGGATGATCACCCCAGCTGTTCGAATTCTCCAGCTAGAATGCAGGGAACATTTGGATATTTTGCACCCGAGTATGCTATTGTCGGGCGAGCCTCTCTTGAATCGGATGTTTTCAGTTTCGGGGTGGTTCTCCTCGAGCTTATCAGTGGTCGGCAACCAATCTATAAAACTACAGGCAAAGAAGAAAGCCTTGTTATATGGGCTGCGCCTCGCTTACAGGATAGTAGGCGAGTAATATCGGAGTTGGTCGATCCACGACTGAAAGGAGACTTCCCGGAAGAAGAGGTACAGATTATGGCATACTTAGCAAAGGAATGTTTGTTGCTGGATCCTGAAATTCGTCCATCCATGAGTGAGGTTGTTCAAATTCTCTCGAGTATTTCGCCCGACAAATCGAGACGAAGAAGAAACATTCCAGCCAGCCTGTTCCTGGAACCAGTAGAAGCAGAAAGATCTCCAGTTCATAATTCATTGCAACAAGACACTGATCATAGATTCTGGGTTGGGAACAAAAACAAAGAAGCTAATGTAGATTCAGCTGAGCATACAGAGAATTTGACCCTCTTGACATCAAAATCCGAGAGTTGCCACGTGTCAGAAGAGGAAATAGTAGACCTAACTGAGCCGCGATACGAATCATTTTGCATGGCAAATGTCAATTTCTCATGA 1824 0.4342 MKLKLRVALAIVFVLLSIQHSFSDEPSDTYGLNKWKCTCAFQGNQSYSIANCSKSCDCRSDAEDTSSIWTCLCNPNGFPQMGVASANGHNHNCFSACNCTWGTNSLPLGSKKHISSKTVVVILLICVVCTTIAFLTSVLCYVYRRDRCPIQTPIFSPEKETSSGSTANLISHRTVTSSVTETKFAIDSPVSNMTGCFQKASFLFGIQRETFHGNIIQFSFAELENATENFLGSNLIGLGGSSYVYRGRLKDGSIVAVKRLKDPGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGRHFQRLLVFEYMSNGNLRDWLDGVSAKNLDWTTRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNVRADDHPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIYKTTGKEESLVIWAAPRLQDSRRVISELVDPRLKGDFPEEEVQIMAYLAKECLLLDPEIRPSMSEVVQILSSISPDKSRRRRNIPASLFLEPVEAERSPVHNSLQQDTDHRFWVGNKNKEANVDSAEHTENLTLLTSKSESCHVSEEEIVDLTEPRYESFCMANVNFS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00179 607 CDD STKc_IRAK 236 512 - -
Arst3g00179 607 PANTHER OS01G0750732 PROTEIN 71 533 - -
Arst3g00179 607 SMART serkin_6 230 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00179 607 SUPERFAMILY Protein kinase-like (PK-like) 211 509 IPR011009 -
Arst3g00179 607 Pfam Protein kinase domain 234 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00179 607 Gene3D Phosphorylase Kinase; domain 1 205 310 - -
Arst3g00179 607 FunFam receptor-like serine/threonine-protein kinase NCRK 204 310 - -
Arst3g00179 607 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Arst3g00179 607 Gene3D Transferase(Phosphotransferase) domain 1 311 526 - -
Arst3g00179 607 ProSiteProfiles Protein kinase domain profile. 230 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00179 607 FunFam receptor-like serine/threonine-protein kinase NCRK 311 521 - -
Arst3g00179 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00179 Arst-Chr3 1295502 1302870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00179 1 604 Receptor kinase-like Gene Family AT2G28250 52.874 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Arst3g00179 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00179 - - gmx:100817870 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01889 8 27158780 27162394 Arst3g00179 3 1295502 1302870 PCT