LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g00175	ATGAAAACCGTTCCGACAACTCCAATCGCCAGGAACCGGAGGTCCGAGCGTCTCGAGAAGAAGACGCCGCCGCCGTCTTCAGCTGCTCCGGCGCCAACGAGAGGGAGTTCCGATCTGAAGAAGGTCGAGAAGTCTGCCTCGGTAGTGCCGACTCCTTTGAGGAGATCTGGGAGGCTTTCCTCTTCTGGTTCTCCTTCCAAAGGCTCCAATTCGAAGAGCTTCGGGTCTTGTTCTACAGAGGAGAAACGGAAGTGTGTGAAGCGGTTGAGAGCTCAAGAAGAAGAAGAAGAAGAGTTGGAGGAAGGTAGTGAGAAAGAGGAACGTGCAGGAAGCGATTCTAAGGTTAACAAGAAGAGATTGCATGCGCGTGTATATCGGGCTTCGTTAAAATCTAAAGGAGATTTTTGTGGGGAATCAAATAAGATGGATAAGTCAACTCAGGAAGGTGATAAGGATAGTGGTAACAAGATGGAAAATGATAGTGTAGTGCCATCTGGAGATGACAAAGCAAAAGAGATGATAGCCGAGTCTAGGTTTAGTGATCCTGTGGAAGACTTATTATTGGAAAATAATGTGGCTCCATCTGGTGCTACAACTGATGAGGCTAGGTTGGCATCTGAATCGAATCAGTCTGGTTGCCGTGGAGAGGAGACATCAGAGACAGTAGTGTCAAGGAATACGAAGAGATCCCAATCTAGGTTGAGTGGGCCTCCAGAAGGACTATCAGAAAAAAATGCATCTAGTGCAGCGCCTCAAAGTGCGCCTCAAAGTGATCACTCTGATTGCAATGGGAACGAGACATCACCGATAAGGAATTCTGTTTTCAATGAAAGTTTGATTCAGAAACGTGTTAGCCATGATAGGGGTGAAAATTTGATACCCTCAAAGAGAAAGGGGACCATGGTGGACATGCATTCAGATGTTTCTGCTACATCGGTTGATGATGAAAACTGCAACTTGGCTGTGGCTGCTGACCCTTCAAAGCTGTGTGGTAGTACTGGAGGGACCAATGGGCCATGCTCTAAAAGGATAAGGCGGATCTCTTTATCAGATGTGCAAAGCGATCAAAGGAAATTGATCAGTAACGTTGACCAGCTTTCTCCAGGAGTTGATGGTGTAAGGCTATCTTCTCGAGACAAGGAAGGCAAATCTCAAGGTAATGATGCTGAATATATAAGGAAACAACAGAGGTGCTTAATACTTCTACTGAAGCCGGAGATAGCAAAGCTTTGTGAACTTCTTCTTTTACCAGATGATGTCAAGAAAATGGCTGATTCTTGTCTTCAATATGTTCTGAACAATCGTCAAATCTGTACAAAACCAGTCTCAATATTGCAGGCCTTTCAATTATCTTTGTGTTGGACTGCTGCTTCTTTGCTAAAGCATAAACTTGATTTTGAAGCTTCCATCAAGCTTGCAAAGCAGCATTTGAATTTCACCTGTAAGAAAGAAATGGTGGATGAAATTTATTCAATGCTGTTGGGACTGAGAGAAGAGATTTTATCCCACATTTGTGGCATCATTGATTCTTCAAAAGCTCCTGAATCATCAAACCGGGTTTATTCCTATAGTGAAGTGGCACCGGTAGTTGATTCAGCCAACAAAGATACTCCGGAAAGTACTAAAGGAATTCCAGAGTGTGAAAACCAGGAGGGGAACATACATCTGATGCTACAGGAAGAAAAACAAAACCTTAAAGCAGCTATGGAGAAAGAGAAGACTGAATTTGAGAGAAGGGTTAAACTCCAGTGGGCAGCTATTCGATGTTGTTCTCCTAATGATGTGACGAGGAGCGAAAAACTCAAGCTTTTCACTAGTGAGTATGAAAAAAGAGTACGAGAATTAAACCGGCAGCATGAAATTCGTCTCAAGGATCTTGAGGCCAAACAATTAAAATCTTTGCAGAAACCCAATATAGTTGAAGCCATATCAAGGCCAGGATCCGAGGTTGGATTATCTAAGTCTCCTGACAATTCTGTTGCATTCCCAGCAGATACTCTCTCTAAGCCTTGGAATTCTAGAGAACAATGTTCTGGTGGAGCCACAAGCGCAGAAGATGAAGCACAAGGGAGTGAAAAAGTTAGTTGTGAATCTCGTAATGGAGAGATATGTGATCAGGAAACATCAGATGTTCCCAATGGAGAGGCAGCTCTTTCAATGTGTAAATTCAGCAATCTGAATGATGATCAAGATGAAGTTCCTCCTTCCTTCAATTCACAATCATCTTCAGAGCATGTCCCATGTTTACCTACCACTAGCATGGTAAGTTGTAAGGAAGCTACAGTAGCTGATGAGAGCAATGTTTCAATAAATGTGGAGACTCCAAATTTGCCTTCATCTGATGAAGGAATTGCTTCTTTGAATTTAAGATCACCTAAAAACCATGCCTATAGTCTAAATGAATTGTGTTTGCAAAGTTCTGAGAAATCTGCACAAACTTGCAAGGCTGTTGAAGGCAATGGTTCAAACAATGCTGTGTCTCAGAATTCACGTTTAATTGACGAGAGAATTGCTGCTGGCACCACAGTAGGTGTCCCAGATAGAGAAGCACATGTGGACATGCTCGGGACTGTCAGTGACAGTCATTGTCCAGAAAATATTACTGCTGTGAATCCCTCTTCATCCATGCAGCAAATACCCGATGGTGTTGTCAATGTCTTGGATTTAGAAGAGTTGTATAGACCATGTGTAACTGATGGTAATGCTATTACTATCTTAAATCAACCTTCGTCAGAGAAACAAAATCATGATGGATTCTCATCATCAACTATACCTGCTGGAGAAATCACAATTGAAGTACCCGAAACTGCTTTAGAGGCCTCAATAGTTGTATCAGATAGGGAATTGTCTGTGGAAATTCTTTCGTCACCCCTGAATCAAACATCTGTTGGAGCTTTCGGTCAAAGCGATACAACTCCCCTTCCAACCACACCCTCTTTACCACAACAAATTCCTGATGCAATATTGCCCTGCATGCCTGATGGACAAATTTCAGCAGAAGTGTCGGAAACTAACCATGAGGTGACTGAATGTCAGTTGACAGAAACAGTCAATACAAGTACCACATCAGACCAGCAGGAAGGAGTGGTAACCATGACAGAGAACACTTCGGTCCAGGAGACTTCAATATCTAGACCTGTTGATATCACGGAGCCTCTGGAACAATCGCAGCCAACATCATCTGTACAGTCCCTACCAGACACTGATAGAGCGAGAGAAGTGCAGAACTCTTTGGTGTCTGGTCCAGTTGATATTGTACTAGATAATCAATCCGATAATTCTTCACAGGTTGTTGAGCCTCAAGAGCAGGTGCAGCAGTTACCTGCTCTTGAGCTACTTCCTTCCAACCAGGATCTGTCTCACTTGCCTTTGGCAGCGGGGGTCGAACATCAGCAAACTAATGGAGATACTGTCCACAGCCATCATCTTGAGTCATCAAGTGAAGTTTCAAATGAAGCTGTAGGGCAGCAATCCTCTACTTCGGAACTTGTTTCACACTCACATCAAGATGTGCAAACAGCCTCGAATCTGGGCCTTGTTTCATCTATACCTGGTGGAGTGAGAGCACAATCTTCAGACTCAAGAAACTTATCCACATCCTCAGGGGTCAATACTCTTCACATTCAAACTGCGGGCACATCAGCTTCTGGGATTGTTCCACCTATAAGCCGTGATCCACTTAAAAATGAATTGGACAGAATACGTAGACTTGGAGAGAAAAATATGAAGAATCATGAAGATGCGGTTAGCTTCTGGTTTACATATTGA	3768	0.4329	MKTVPTTPIARNRRSERLEKKTPPPSSAAPAPTRGSSDLKKVEKSASVVPTPLRRSGRLSSSGSPSKGSNSKSFGSCSTEEKRKCVKRLRAQEEEEEELEEGSEKEERAGSDSKVNKKRLHARVYRASLKSKGDFCGESNKMDKSTQEGDKDSGNKMENDSVVPSGDDKAKEMIAESRFSDPVEDLLLENNVAPSGATTDEARLASESNQSGCRGEETSETVVSRNTKRSQSRLSGPPEGLSEKNASSAAPQSAPQSDHSDCNGNETSPIRNSVFNESLIQKRVSHDRGENLIPSKRKGTMVDMHSDVSATSVDDENCNLAVAADPSKLCGSTGGTNGPCSKRIRRISLSDVQSDQRKLISNVDQLSPGVDGVRLSSRDKEGKSQGNDAEYIRKQQRCLILLLKPEIAKLCELLLLPDDVKKMADSCLQYVLNNRQICTKPVSILQAFQLSLCWTAASLLKHKLDFEASIKLAKQHLNFTCKKEMVDEIYSMLLGLREEILSHICGIIDSSKAPESSNRVYSYSEVAPVVDSANKDTPESTKGIPECENQEGNIHLMLQEEKQNLKAAMEKEKTEFERRVKLQWAAIRCCSPNDVTRSEKLKLFTSEYEKRVRELNRQHEIRLKDLEAKQLKSLQKPNIVEAISRPGSEVGLSKSPDNSVAFPADTLSKPWNSREQCSGGATSAEDEAQGSEKVSCESRNGEICDQETSDVPNGEAALSMCKFSNLNDDQDEVPPSFNSQSSSEHVPCLPTTSMVSCKEATVADESNVSINVETPNLPSSDEGIASLNLRSPKNHAYSLNELCLQSSEKSAQTCKAVEGNGSNNAVSQNSRLIDERIAAGTTVGVPDREAHVDMLGTVSDSHCPENITAVNPSSSMQQIPDGVVNVLDLEELYRPCVTDGNAITILNQPSSEKQNHDGFSSSTIPAGEITIEVPETALEASIVVSDRELSVEILSSPLNQTSVGAFGQSDTTPLPTTPSLPQQIPDAILPCMPDGQISAEVSETNHEVTECQLTETVNTSTTSDQQEGVVTMTENTSVQETSISRPVDITEPLEQSQPTSSVQSLPDTDRAREVQNSLVSGPVDIVLDNQSDNSSQVVEPQEQVQQLPALELLPSNQDLSHLPLAAGVEHQQTNGDTVHSHHLESSSEVSNEAVGQQSSTSELVSHSHQDVQTASNLGLVSSIPGGVRAQSSDSRNLSTSSGVNTLHIQTAGTSASGIVPPISRDPLKNELDRIRRLGEKNMKNHEDAVSFWFTY	1255

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1	298	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1147	1178	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	54	76	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	136	183	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	651	689	-	-
	Arst3g00175	1255	PANTHER	HELICASE PROTEIN MOM1	11	1247	IPR039322	GO:0031507
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	690	704	-	-
	Arst3g00175	1255	Coils	Coil	555	579	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1082	1102	-	-
	Arst3g00175	1255	Coils	Coil	609	629	-	-
	Arst3g00175	1255	Coils	Coil	82	109	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1134	1178	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	647	711	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	192	280	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	77	94	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1013	1102	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	104	118	-	-
	Arst3g00175	1255	MobiDBLite	consensus disorder prediction	1013	1075	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g00175	Arst-Chr3	1257836	1265610	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g00175	-		-	adu:107476979	2363.96

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst3g00175	3	1257836	1265610	Arst3g00175	3	1257836	1265610	ECH
	Arst8g01895	8	27256253	27269053	Arst3g00175	3	1257836	1265610	PCT