Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00174 ATGATTCACCTTTGTTTTGTTTCCTTAATTAGCATTAGTGTATGTTATGCTCAACAATATTATGATCCTAACAGTTGTAATTTAAATGAAACAATCTCAGGATCAAGATACACTTGCAATTCAACAAACCATTCATGCAAAACATTCTTGGTTTACAAAGCCAACAAAAACTTTCAAACTATTTCAAATATCTCAGCATTGTTCCACATGCAAACTCATGATGTTCTTGAACTAAACAACCTCACATCTTCTTCTGATGTATTAGAAGAAGGTAAAGAGGTTCTTGTTCCTATTAACTGCTCATGCATTGGTCAATTTTATCAATTTAATAGTTTCACCTATAGAGTCACTCATAACACCACATTCTATGATGTTGCATGCCAAGTGTTTGAAGGATTGCTGAGTCCAGTAACACTTTCTGAGGAAAATGTTCCACTTGGGAATAAACCAGATTCTGGTTTTGAAATTAAGATCCCTCTTAGATGTGCATGTGTTGATGATGTCATCAGTAGCATGATGAAGGTTAAGTACCTTGTCACATACCCTGTAGTTTTAGGTGATGATCCGGGAAAATTGACCAAGAAATTTGGTGTCTCAGGTGATGATTTCTATGCAGCTAATGGCTTGAAAGATTGGGCAACCATTTTCCCCAAAACATCTGTTTTGATTCCAATAAGGGACGTTCCAATCAAAATCTTTGATGTTCAAGATTCTCCTTCTCCACCTCCTGGTTTTCTTCCAACAACACCAGTGGTGGAGGCAGGAGAAACCACACAAGGTTCGGATTTATATATTGCAGGGCCTCTTATAGGATTTGGTTTGCTCATAGCATTACTTGCAAGTGGATTATATGTTAAGAGCTTGAAGAAATGGAAAAATGATGCTGTTGTCCCTTCCAGTGATTCAAACTCCACCAACCTGATATGCTCAACAACTGGAAGCTCTCCTATGTATATGGAAACCAGCAGAAGATGCTCCACGGCCTCATGGCTGACGCCGGATCTTCTTGCAGAAATTAAGTACTGCTTGGTTAACTACACCATAGAGGAGATTGAGAAGGCCACCAAGAATTTCAGTGACGAAAACAAGATTGGTGATTTGGCCTATAAGGGATTACTCAATAATCTTGAGGAGGTGATGGTAAAGAGGATGAGGTTTGAAGACACAGGACAGGTAATTGATTTGCATTCTAAGATCAACCACTTTAACATTGTGGAATTGCTTGGTGTTTGTTATGGTAGTGAGAGCAAAGTTTCATCATCACCATCATGGTCTTATCTGATTTTTGAATTGCCTAGAAATGGTTGCTTAAGGGAGTGTTTATCTGATCCATGCAATAATCTAAATTGGTACAAAAGGATACAAATTGCTTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTGCTTTCCCTTCATATGCTCACATGAATGTCAATAGTAGAAACATATTCATAACTTCAAAATGGAGGGGGAAACTAGCAGATGTTGGTAGAGCATTGGCTATAAAATCCACACCCCAAAAGAGAAATAATGATAGTATAGAACTTGTTAAAGGATGGGTGGCACCAGAATACCTCTTGAATAGGACAGTTTCTGAGAAAGTTGACATTTTTGCATTTGGGGTTGTGTTGCTTGAGTTGATCTCAGGAAGGGACAATTTTGATGAGAAAACAGCGAAAGATTCACTTGGATTTTTGTTGGGGGAAGCAAGTGAAGGTGGGTGTTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATCTGAAGGATTATGATCTCCCAGAAGCTTTGTGTTTGTCTTTCTTGGCAAAGGATTGTGTTGCAGATGATCCAATGTATAGACCAACCATGGATGATATCATGAAAGTCCTTTCAAAAATGGTTTAA 1890 0.3804 MIHLCFVSLISISVCYAQQYYDPNSCNLNETISGSRYTCNSTNHSCKTFLVYKANKNFQTISNISALFHMQTHDVLELNNLTSSSDVLEEGKEVLVPINCSCIGQFYQFNSFTYRVTHNTTFYDVACQVFEGLLSPVTLSEENVPLGNKPDSGFEIKIPLRCACVDDVISSMMKVKYLVTYPVVLGDDPGKLTKKFGVSGDDFYAANGLKDWATIFPKTSVLIPIRDVPIKIFDVQDSPSPPPGFLPTTPVVEAGETTQGSDLYIAGPLIGFGLLIALLASGLYVKSLKKWKNDAVVPSSDSNSTNLICSTTGSSPMYMETSRRCSTASWLTPDLLAEIKYCLVNYTIEEIEKATKNFSDENKIGDLAYKGLLNNLEEVMVKRMRFEDTGQVIDLHSKINHFNIVELLGVCYGSESKVSSSPSWSYLIFELPRNGCLRECLSDPCNNLNWYKRIQIAFDIATCLYYLHCCAFPSYAHMNVNSRNIFITSKWRGKLADVGRALAIKSTPQKRNNDSIELVKGWVAPEYLLNRTVSEKVDIFAFGVVLLELISGRDNFDEKTAKDSLGFLLGEASEGGCFEGLRSFMDPNLKDYDLPEALCLSFLAKDCVADDPMYRPTMDDIMKVLSKMV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00174 629 ProSiteProfiles Protein kinase domain profile. 273 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g00174 629 Gene3D Phosphorylase Kinase; domain 1 324 418 - -
Arst3g00174 629 Pfam Protein tyrosine and serine/threonine kinase 392 566 IPR001245 GO:0004672|GO:0006468
Arst3g00174 629 SUPERFAMILY Protein kinase-like (PK-like) 339 625 IPR011009 -
Arst3g00174 629 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Arst3g00174 629 Gene3D Transferase(Phosphotransferase) domain 1 433 629 - -
Arst3g00174 629 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00174 Arst-Chr3 1253074 1255402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00174 3 629 Receptor kinase-like Gene Family AT2G23770 29.042 7.31e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst3g00174 PK_Tyr_Ser-Thr 8.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00174 - - gmx:100818937 774.622