Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00167 ATGAGTAGCTTAAGGCCTGAATTGCATGTTGCACAGCAAATTCGGCGTGACAAGCTCAGATTCCAGAATCTACAACAAGATTTCCCAACAAACCTTGAAGAACAAATTTCACTTCACCAACAAGATTCCAGAATCTACAACATGCTTCATGATGTTGAACAACCACCACCACAACAACAATCTCTCTATTATGCTTCTTCATCCCCACAACAACAATGTATGATTAATAACAACTGTTACTATTACTCGGGTAATTGCATGGTCAATAATTTTGCAACACTAAGTCCTAGTGTGGCTAATAACCACAACCATATAGTGACGGTTGCACATTATTCTTCTTCACAACAGAATAGTAGTAGCAGTAGTAGTAATAATAATGCGGCTTTGCAAGATATTCTGAATCTTAAGCCAGCTTCTAATAACTCAGAAATGCATCATCATCCCTATGTTATTGACAATTGTACCCCTACTGCTGCTGCTGCTGGTGGTTGGAATAATCATAATAATAATCATCATCAGGGGTTGTCCTTATCACTCTCATCATCATCACCATTAAATGTTCATGTGAAATCTTCTACTACTACTAATCCAATGATGATGATGAAGCCATCAACTACTTCTCCTGCATCATCAAGTTACTATTACAGAAACAGTGTTGGTCCACTAGGTCCATTCACGGGATATGCAACAATCTTAAAGAGTTCAAGGTTCTTGAAGCCATGTCAAAAGTTGTTAGATGAATATTGCCGCCGCCATTCTGCTCCATCAACATCAGAATGGCCTTCTACTACTACTTGTGCCGATGATGATGATGATGATAACCATGATCATGGGTTACTTGTTTCTGAAAAGGGAGGTGGTAGTAGTAGTAATAATAATAATAATGTTGCAGCAGCAGGTTCTTCTTCATCTTCTTCCATGTTCCATGCCCCTTCTTCTTCTTCTCCTTCTCGGCCAGAGTGCCAAAAGAATAAGGCCAAACTACTGTTCATGCAAGAAGAGGTTACAAGGAGATACAAGCATTACCATCAACAAATGCAAATGGTGGTTTCATCCTTTGAGACAGTGGCAGGCCTCAATTCTGCAACCCCATACGTTTCCTTGGCGCTCAAGTTAGTATCAAAGAACTTCAAGTCCCTAAAGAACTCCATCTCCGGTCAGCTCAAGCTTATATGTCAAGCCTTGGGAGAGGATTATCCGACAATGCCGCCGGCCCCCACGAGTACTAGTAACCGATTCGAGTCGAACATGGCGAGGTTACAGAGGAACAAGCCCGGTGGTGGTGGGGGTAATATGGACTTTGAACCTCAACAACATGTTTGGAGGCCGCAGCGCGGCTTACCGGAGCGCGCCGTGGCCATCCTTAAATCATGGTTGTTTGAGCATTTTCTTCATCCGTACCCCACGGACACAGATAAACATATGCTAGCTACTCAAACTGGTCTATCAAGAAATCAGGTATCAAATTGGTTCATAAATGCTAGAGTCCGGGTATGGAAGCCAATGGTTGAGGAAATTCACATGCTCGAAACAAAAGGCGCCAATCAGATTTCTAGCAATAGAATGGGGGAGGGAAATTCAGCCTCCAATGAAAGTAGCAACCATGCCAAAGTATTAGTTGATCAACCTCTCGCTATCTCGGAGAGGCAAATTCGGTGTTTGGAAATGGGATCATCATCATCATCCTTGGCCAATGATGAAGAGGTACAATGGAGTCAAGAGAAGAGGTCTAAATTGGAATGCATGGATGGGACATTGATGGGTTTGATGCCGTTCCGCGGCGCCGGCGTCGGTGTCGGCGCCGAGGTTCGGGGACTTGGACCTGTGTCACTAACTTTGGAATTAAGGCATGGAGTTGAAGGATCACAACAACAACAACAAGAGGAGCAGCTTAGACACCACTTTGGAGGGCACATGATTCATGATTTCGTAGGGTAA 1938 0.4334 MSSLRPELHVAQQIRRDKLRFQNLQQDFPTNLEEQISLHQQDSRIYNMLHDVEQPPPQQQSLYYASSSPQQQCMINNNCYYYSGNCMVNNFATLSPSVANNHNHIVTVAHYSSSQQNSSSSSSNNNAALQDILNLKPASNNSEMHHHPYVIDNCTPTAAAAGGWNNHNNNHHQGLSLSLSSSSPLNVHVKSSTTTNPMMMMKPSTTSPASSSYYYRNSVGPLGPFTGYATILKSSRFLKPCQKLLDEYCRRHSAPSTSEWPSTTTCADDDDDDNHDHGLLVSEKGGGSSSNNNNNVAAAGSSSSSSMFHAPSSSSPSRPECQKNKAKLLFMQEEVTRRYKHYHQQMQMVVSSFETVAGLNSATPYVSLALKLVSKNFKSLKNSISGQLKLICQALGEDYPTMPPAPTSTSNRFESNMARLQRNKPGGGGGNMDFEPQQHVWRPQRGLPERAVAILKSWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGANQISSNRMGEGNSASNESSNHAKVLVDQPLAISERQIRCLEMGSSSSSLANDEEVQWSQEKRSKLECMDGTLMGLMPFRGAGVGVGAEVRGLGPVSLTLELRHGVEGSQQQQQEEQLRHHFGGHMIHDFVG 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00167 645 Gene3D - 444 506 - -
Arst3g00167 645 MobiDBLite consensus disorder prediction 284 321 - -
Arst3g00167 645 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 121 529 - -
Arst3g00167 645 Pfam Homeobox KN domain 458 497 IPR008422 GO:0003677|GO:0006355
Arst3g00167 645 ProSiteProfiles 'Homeobox' domain profile. 438 501 IPR001356 GO:0003677
Arst3g00167 645 MobiDBLite consensus disorder prediction 252 322 - -
Arst3g00167 645 Pfam Associated with HOX 231 385 IPR006563 -
Arst3g00167 645 MobiDBLite consensus disorder prediction 174 211 - -
Arst3g00167 645 CDD homeodomain 441 502 IPR001356 GO:0003677
Arst3g00167 645 SUPERFAMILY Homeodomain-like 443 507 IPR009057 -
Arst3g00167 645 SMART HOX_1 441 505 IPR001356 GO:0003677
Arst3g00167 645 SMART prehox3 226 386 IPR006563 -
Arst3g00167 645 FunFam BEL1-like homeodomain protein 9 444 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00167 Arst-Chr3 1183049 1190710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00167 173 510 Homeobox Transcription Factor Family AT4G34610 40.882 1.21e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst3g00167 POX 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00167 - - aip:107629241 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01899 8 27305540 27311220 Arst3g00167 3 1183049 1190710 PCT