Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00163 ATGAAGTTTTCTTCTAATAATACCCCACCCCCTCATAAGGTTAGCATCAATAATAATAATAATATTAATAATAAAGATCGTCACAGAAAGGTTAATGGAAGAGAAAGTCGCATTCTGTTGCCACCGTTATGTGCTGCGCGCGTGTTCCAGCTCACGCGCGAGCTAGGGCACAAGACTCATGGTGACACAATTGAGTGGCTCTTGCGCCACGCCGAACCTTCCATAGCCGCTGCAACTGGCGGCAAAAGTATAGTGCCACCACCACCATCATCATCGACCACCAATGATAATCAAGGTGTGAAAAATGGTGGTGGTGACACTGGGTGGTTGGAGTATGATGTTCTTGCAAACCTTGGTGTAGGGTTTTCTGCCAATGAAATTGCAGTGATCCAAGCAATGATCAAGAGCTTCAGCTGA 417 0.458 MKFSSNNTPPPHKVSINNNNNINNKDRHRKVNGRESRILLPPLCAARVFQLTRELGHKTHGDTIEWLLRHAEPSIAAATGGKSIVPPPPSSSTTNDNQGVKNGGGDTGWLEYDVLANLGVGFSANEIAVIQAMIKSFS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00163 138 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 99 IPR005333 GO:0003700
Arst3g00163 138 MobiDBLite consensus disorder prediction 79 104 - -
Arst3g00163 138 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g00163 138 Pfam TCP family transcription factor 24 92 IPR017887 -
Arst3g00163 138 MobiDBLite consensus disorder prediction 1 34 - -
Arst3g00163 138 ProSiteProfiles TCP domain profile. 24 78 IPR017887 -
Arst3g00163 138 MobiDBLite consensus disorder prediction 85 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00163 Arst-Chr3 1155369 1155785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00163 24 130 TCP Transcription Factor Family AT5G41030 45.528 8.35e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst3g00163 TCP 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00163 - - ahf:112736155 243.047