Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00146 ATGGTGTCGGACGCAAGCAAGAAGAAGGCTGCGCAGAAGAAGATCGCCGCCGCAGCTAAGAGAGGCGGCAAGGCTGCTGCTGCCGCGGTTGCTTCCAAGGTGGCGGCGGTTGACGCTCATAAGGCGGCTGTTAAGGTGGCGAATGAGATCGCCGACCTTCGTATATCGGATCGTACTTGTACTGGTGTCCTCTGCTCCCATCCTCTGTCCAGGGATATTCGGATAGAATCTCTATCGGTTACATTCCATGGACATGACCTAATAGTTGATTCTGAATTGGAGTTAAACTATGGAAGACGCTATGGTCTACTTGGATTAAATGGATGTGGAAAATCTACTTTGCTTACGGCAATAGGTTGCCGTGAACTGCCGATTCCTGAGCACATGGATATCTATCACCTTAGCAGGGAAATTGAAGCCACAGATATGTCTGCATTGGAGGCAGTCATAAACTGCGACGAGGAAAGATTGAAGTTGGAAAAAGAAGCGGAAGCTTTGGCTGCCCAGGATGATGGTGGTGGTGAAACTCTTGAACGGATTTATGAACGATTAGAAGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACATGGTCTCGGTTTCAACAAGGAGATGCAAGCAAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGAATTGCACTAGCTCGAGCTCTATTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTATGGCTTGAGGAGAGCTTGAAGAAGTTTGACCGTATACTGGTTGTGATTTCACACTCTCAGGACTTCCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAACAAAAAACTAAAGCTTTACACCGGTAACTATGACCAGTACGTTCAGACTCGTTCTGAGTTGGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAAGAGCAGATTGCCTCAATGAAGGAATATATTGCTCGATTCGGCCACGGTTCGGCAAAACTAGCTCGCCAAGCACAAAGTAAAGAGAAAACACTGGCTAAAATGGAACGGGGTGGACTTACCGAGAGAGTGGTTAAAGACAAAGTCTTGGTGTTCCATTTTACTGATGTGGGAAAACTTCCCCCTCCTGTTCTTCAGTTTGTTGAGGTGACGTTTGGTTATACCCCTGATAATCTCATTTACAAGAATATCGACTTTGGTGTTGATTGTGACTCTAGGGTAGCCCTGGTTGGACCCAACGGTGCCGGAAAGAGTACACTACTGAAACTCATGACGGGTGACTTAATTCCCAATGATGGCATGGTCCGGCGTCACAACCATCTTCGAATTGCTCAATTTCACCAGCACTTGGCTGATAAGCTGGACATGGAGATGTCTGCACTCCAGTTTATGATGAAAGAGTACCCTGGAAATGAGGAAGAGAAGATGAGAGCAGCTATTGGGAAGTTTGGGCTGTCAGGTAAAGCTCAGATAATGCCTATGAAGAACTTGTCTGATGGGCAGAGGAGCCGTGTGATATTTGCATGGCTAGCCTGGAAGCAGCCTCATTTGCTACTCCTGGATGAGCCAACTAATCATTTGGATATCGAGACAATTGACTCATTGGCCGAGGCATTGAACGAATGGGATGGCGGCATGGTGCTCGTTAGCCATGACTTCAGGCTCATAAACCAGGTGGCCCATGAGATATGGGTGTGTGCAAATCAAACTATCACCAGATGGGATGGTGATATCATGGACTTCAAGATGCATCTCAAATCACAGGCAGGCTTATCTGACTGA 1800 0.4644 MVSDASKKKAAQKKIAAAAKRGGKAAAAAVASKVAAVDAHKAAVKVANEIADLRISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLSREIEATDMSALEAVINCDEERLKLEKEAEALAAQDDGGGETLERIYERLEALDAATAEKRAAEILHGLGFNKEMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTERVVKDKVLVFHFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDCDSRVALVGPNGAGKSTLLKLMTGDLIPNDGMVRRHNHLRIAQFHQHLADKLDMEMSALQFMMKEYPGNEEEKMRAAIGKFGLSGKAQIMPMKNLSDGQRSRVIFAWLAWKQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCANQTITRWDGDIMDFKMHLKSQAGLSD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00146 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 313 IPR003439 GO:0005524
Arst3g00146 599 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524|GO:0016887
Arst3g00146 599 Coils Coil 149 169 - -
Arst3g00146 599 Pfam ABC transporter 284 357 IPR032781 -
Arst3g00146 599 Gene3D - 349 597 IPR027417 -
Arst3g00146 599 Coils Coil 291 311 - -
Arst3g00146 599 Pfam ABC transporter 91 245 IPR003439 GO:0005524
Arst3g00146 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 599 IPR003439 GO:0005524
Arst3g00146 599 Gene3D - 73 337 IPR027417 -
Arst3g00146 599 CDD ABCF_EF-3 384 576 - -
Arst3g00146 599 CDD ABCF_EF-3 73 290 - -
Arst3g00146 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 580 IPR027417 -
Arst3g00146 599 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 42 594 - -
Arst3g00146 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 320 IPR027417 -
Arst3g00146 599 FunFam Abc transporter f family member 1 73 337 - -
Arst3g00146 599 SMART AAA_5 409 595 IPR003593 GO:0016887
Arst3g00146 599 SMART AAA_5 97 299 IPR003593 GO:0016887
Arst3g00146 599 FunFam ATP-binding cassette sub-family F member 3 344 598 - -
Arst3g00146 599 Pfam ABC transporter 400 531 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00146 Arst-Chr3 1022993 1027315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00146 204 271 Calmodulin-binding Proteins AT2G36910 41.429 5.99e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00146 K06185 - gmx:100809491 1033.86