Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst3g00146 | ATGGTGTCGGACGCAAGCAAGAAGAAGGCTGCGCAGAAGAAGATCGCCGCCGCAGCTAAGAGAGGCGGCAAGGCTGCTGCTGCCGCGGTTGCTTCCAAGGTGGCGGCGGTTGACGCTCATAAGGCGGCTGTTAAGGTGGCGAATGAGATCGCCGACCTTCGTATATCGGATCGTACTTGTACTGGTGTCCTCTGCTCCCATCCTCTGTCCAGGGATATTCGGATAGAATCTCTATCGGTTACATTCCATGGACATGACCTAATAGTTGATTCTGAATTGGAGTTAAACTATGGAAGACGCTATGGTCTACTTGGATTAAATGGATGTGGAAAATCTACTTTGCTTACGGCAATAGGTTGCCGTGAACTGCCGATTCCTGAGCACATGGATATCTATCACCTTAGCAGGGAAATTGAAGCCACAGATATGTCTGCATTGGAGGCAGTCATAAACTGCGACGAGGAAAGATTGAAGTTGGAAAAAGAAGCGGAAGCTTTGGCTGCCCAGGATGATGGTGGTGGTGAAACTCTTGAACGGATTTATGAACGATTAGAAGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACATGGTCTCGGTTTCAACAAGGAGATGCAAGCAAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGAATTGCACTAGCTCGAGCTCTATTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTTGATTTGGAAGCTTGTGTATGGCTTGAGGAGAGCTTGAAGAAGTTTGACCGTATACTGGTTGTGATTTCACACTCTCAGGACTTCCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAACAAAAAACTAAAGCTTTACACCGGTAACTATGACCAGTACGTTCAGACTCGTTCTGAGTTGGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAAGAGCAGATTGCCTCAATGAAGGAATATATTGCTCGATTCGGCCACGGTTCGGCAAAACTAGCTCGCCAAGCACAAAGTAAAGAGAAAACACTGGCTAAAATGGAACGGGGTGGACTTACCGAGAGAGTGGTTAAAGACAAAGTCTTGGTGTTCCATTTTACTGATGTGGGAAAACTTCCCCCTCCTGTTCTTCAGTTTGTTGAGGTGACGTTTGGTTATACCCCTGATAATCTCATTTACAAGAATATCGACTTTGGTGTTGATTGTGACTCTAGGGTAGCCCTGGTTGGACCCAACGGTGCCGGAAAGAGTACACTACTGAAACTCATGACGGGTGACTTAATTCCCAATGATGGCATGGTCCGGCGTCACAACCATCTTCGAATTGCTCAATTTCACCAGCACTTGGCTGATAAGCTGGACATGGAGATGTCTGCACTCCAGTTTATGATGAAAGAGTACCCTGGAAATGAGGAAGAGAAGATGAGAGCAGCTATTGGGAAGTTTGGGCTGTCAGGTAAAGCTCAGATAATGCCTATGAAGAACTTGTCTGATGGGCAGAGGAGCCGTGTGATATTTGCATGGCTAGCCTGGAAGCAGCCTCATTTGCTACTCCTGGATGAGCCAACTAATCATTTGGATATCGAGACAATTGACTCATTGGCCGAGGCATTGAACGAATGGGATGGCGGCATGGTGCTCGTTAGCCATGACTTCAGGCTCATAAACCAGGTGGCCCATGAGATATGGGTGTGTGCAAATCAAACTATCACCAGATGGGATGGTGATATCATGGACTTCAAGATGCATCTCAAATCACAGGCAGGCTTATCTGACTGA | 1800 | 0.4644 | MVSDASKKKAAQKKIAAAAKRGGKAAAAAVASKVAAVDAHKAAVKVANEIADLRISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLSREIEATDMSALEAVINCDEERLKLEKEAEALAAQDDGGGETLERIYERLEALDAATAEKRAAEILHGLGFNKEMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTERVVKDKVLVFHFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDCDSRVALVGPNGAGKSTLLKLMTGDLIPNDGMVRRHNHLRIAQFHQHLADKLDMEMSALQFMMKEYPGNEEEKMRAAIGKFGLSGKAQIMPMKNLSDGQRSRVIFAWLAWKQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCANQTITRWDGDIMDFKMHLKSQAGLSD | 599 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst3g00146 | 599 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 73 | 313 | IPR003439 | GO:0005524 | |
Arst3g00146 | 599 | ProSitePatterns | ABC transporters family signature. | 217 | 231 | IPR017871 | GO:0005524|GO:0016887 | |
Arst3g00146 | 599 | Coils | Coil | 149 | 169 | - | - | |
Arst3g00146 | 599 | Pfam | ABC transporter | 284 | 357 | IPR032781 | - | |
Arst3g00146 | 599 | Gene3D | - | 349 | 597 | IPR027417 | - | |
Arst3g00146 | 599 | Coils | Coil | 291 | 311 | - | - | |
Arst3g00146 | 599 | Pfam | ABC transporter | 91 | 245 | IPR003439 | GO:0005524 | |
Arst3g00146 | 599 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 384 | 599 | IPR003439 | GO:0005524 | |
Arst3g00146 | 599 | Gene3D | - | 73 | 337 | IPR027417 | - | |
Arst3g00146 | 599 | CDD | ABCF_EF-3 | 384 | 576 | - | - | |
Arst3g00146 | 599 | CDD | ABCF_EF-3 | 73 | 290 | - | - | |
Arst3g00146 | 599 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 366 | 580 | IPR027417 | - | |
Arst3g00146 | 599 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 42 | 594 | - | - | |
Arst3g00146 | 599 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 65 | 320 | IPR027417 | - | |
Arst3g00146 | 599 | FunFam | Abc transporter f family member 1 | 73 | 337 | - | - | |
Arst3g00146 | 599 | SMART | AAA_5 | 409 | 595 | IPR003593 | GO:0016887 | |
Arst3g00146 | 599 | SMART | AAA_5 | 97 | 299 | IPR003593 | GO:0016887 | |
Arst3g00146 | 599 | FunFam | ATP-binding cassette sub-family F member 3 | 344 | 598 | - | - | |
Arst3g00146 | 599 | Pfam | ABC transporter | 400 | 531 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst3g00146 | Arst-Chr3 | 1022993 | 1027315 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst3g00146 | 204 | 271 | Calmodulin-binding Proteins | AT2G36910 | 41.429 | 5.99e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst3g00146 | K06185 | - | gmx:100809491 | 1033.86 |