Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00144 ATGCAGCGATCCGGTTACGGCGCCGACGGAATATATAGGTCCTTGAGACCTTCCTTTTCCCTTCCCAAAACCACCACCTCCCTCACCTCCTTCCTCTTCCAAAACACCACCGCCACCTCTTCCTCCGCTTCCAAAACCGCCCTCATCGACGCCGACACCTCCGAAACACTCACCTTCCGCCAACTCAAAACCACCGTCGCCAAGCTCTCCCACGCCCTCCTCCGCCTCGGCCTCAAAAAACACGACGTCCTCCTCATCCTCGCCCCAAACTCCATCCACTTCCCTATCTTGTTCCTCGCCGCCACCGCCATCGGCGCCGTCGTGACCACCGCGAACCCTCTTTACACCGTGACGGAGCTCTCCAAACAAATCAACAACTCCAACCCGAAGCTCGTGGTCACAGTTGCAGAATTATACGAGAAAGTCAGATCCTTCAAGTTCGAATTGCCCGCAGTGTTAATCGGTTCCGAAACGACACCAGAAACAATCAATTATAGTCGTTTAATGGAAGAAGTGGCAGGGGAGAATGAGTTACCAGTAAACGACGTGAATGAAGACGATACGGCAGCGCTTTTGTATTCTTCGGGAACGATGGGAGTGAGCAAGGGCGTGATTCTGACGCACGGGAATTTCATAGCGGCTGCGTTGATGATTGGAATGGACGACGATTACGTGGACGAACTTGAGGGAGTAAACGACAGCGTGTACCTCTGCGTTTTACCGATGTTCCACGTATTCGGGTTGGCAGTTATCCTGTACGCGCAGCTTAGAAGAGGGAGCACGGTGGTGTCCATGAGGAGATTCGAGTTGGAGAAGTTTCTAGAAGGCATTGAGAAGCACAAGGTGACGAACCTTTGGGTTGTGCCTCCGATCCTGCTTGCAATGGTCAAGCACAGCGTTGTGGATAAGTATGACGTGTCATCGTTGAGAAGGATTGGTTCCGGTGCGGCTCCTCTTGGCAAGGAATTGATGCGAGATTGTTCCAACCGTTTTCCTCATGCTGCTCTCATTCAGGGGTATGGAATGACAGAAACTTGTGGCATTATTTCTGTGGAGAATCCAAGAGCAGGGGTTCGTCATAGTGGTTCAACTGGAATGCTAGTGTCTGGAGTGGAAGCTCAAATCATGAGTGTTGATACGAACAAGCCCCTTCCCCCTAAACAATTGGGTGAGATTTGGGTACGGGGTCCAAATATGATGAAAGGTTATTTTAAGAATCCAGAGGCTACAAGATCAACTATAGATAGCAAAGGGTGGGTACATACCGGAGATCTTGGATATTTTGATGAGGAGGGTCAACTTTATGTTGTTGACCGTCTCAAAGAACTCATCAAGTATAAAGGTCTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTCGTTTCTCACCCTCAAATATTAGATGCTGTTGTCATCCCATATCCGGATGATGAAGCTGGTGAGGTTCCAATTGCCTTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAGATGTTCAGAAGTTTATTGCTAATCAGGTTGCACCATTCAAAAGATTGCGAAGGGTGACATTCATCAACGGTGTTCCTAAGACAGCTTCAGGAAAAATACTCAGAAGAGACCTCATAGCAAAAGTACGATCCAAAATATAG 1635 0.4881 MQRSGYGADGIYRSLRPSFSLPKTTTSLTSFLFQNTTATSSSASKTALIDADTSETLTFRQLKTTVAKLSHALLRLGLKKHDVLLILAPNSIHFPILFLAATAIGAVVTTANPLYTVTELSKQINNSNPKLVVTVAELYEKVRSFKFELPAVLIGSETTPETINYSRLMEEVAGENELPVNDVNEDDTAALLYSSGTMGVSKGVILTHGNFIAAALMIGMDDDYVDELEGVNDSVYLCVLPMFHVFGLAVILYAQLRRGSTVVSMRRFELEKFLEGIEKHKVTNLWVVPPILLAMVKHSVVDKYDVSSLRRIGSGAAPLGKELMRDCSNRFPHAALIQGYGMTETCGIISVENPRAGVRHSGSTGMLVSGVEAQIMSVDTNKPLPPKQLGEIWVRGPNMMKGYFKNPEATRSTIDSKGWVHTGDLGYFDEEGQLYVVDRLKELIKYKGLQVAPAELEGLLVSHPQILDAVVIPYPDDEAGEVPIAFVVRSPNTSLTEQDVQKFIANQVAPFKRLRRVTFINGVPKTASGKILRRDLIAKVRSKI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00144 544 Pfam AMP-binding enzyme 42 446 IPR000873 -
Arst3g00144 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Arst3g00144 544 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Arst3g00144 544 SUPERFAMILY Acetyl-CoA synthetase-like 42 541 - -
Arst3g00144 544 Gene3D - 9 441 IPR042099 -
Arst3g00144 544 Gene3D - 442 543 IPR045851 -
Arst3g00144 544 CDD 4CL 25 536 - -
Arst3g00144 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 538 - -
Arst3g00144 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00144 Arst-Chr3 1007942 1011086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00144 1 544 Monolignol Biosynthesis Gene Families AT4G05160 64.738 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00144 K01904 - gmx:100808944 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01912 8 27564430 27567627 Arst3g00144 3 1007942 1011086 PCT