Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00124 ATGGAAACCAAGGCTGAAGTTGTTTCTTCTTCTGCTGAATCCAGCTCCAAACACGTTTCTCCAATGGAACTTGGAATTGAGAATTTTGGGTGCAAACATTACAGAAGGAGATGCAAGATCAGAGCACCATGTTGTGATGAGGTTTTTGATTGTAGGCATTGCCACAACGATGCTAAGAACTCTGAGGAGATTAATGTTAAGGATCGTCATGATATCCCACGCCATGAAATTAACAAGGTCATTTGTTCTGTGTGTGATACAGAACAAGATGTTCAACAGAACTGCATAAACTGTGGGGTATGCATGGGCAAGTATTTTTGTGGTACTTGCAAATTCTTTGATGATGATGTTTCAAAGAACCAGTACCACTGTGATGATTGTGGCATCTGCAGAACTGGAGGAAAGGATAACTTTTTCCATTGCAAGAAATGTGGGTGCTGCTACTCTAAAATAATGGAAGCTGGTCATCGCTGTGTGGAAAGAGCAATGCATCACAATTGTCCTGTTTGCTTTGAGTATCTGTTTGAGACATTAAGGGATATTACTGTGTTGCCTTGTGGGCATACCATACATTTGGAGTGTGTCAAAGAGATGGAAAGACATCATAGGTACTCTTGTCCGGTTTGCTCCAAATCCATTTGTGACATGTCAAGTTTATGGAAGAAGCTTGATCAAGTGATTGCCTCAACTCCAATGCCAGAAACCTACAAAAACAAGATGGTGTGGATTCTGTGTAATGATTGTGGAGTGAATTCTCAAGTGCAATTCCATGTTGTGGCACATAAATGCTTAAGTTGCAACTCTTACAATACAAGGCAGATACAGGGGAGCCCTGCTACCTCATGTTCTTCAAGAGTCACTGAGATGGTTAGGTGA 876 0.4121 METKAEVVSSSAESSSKHVSPMELGIENFGCKHYRRRCKIRAPCCDEVFDCRHCHNDAKNSEEINVKDRHDIPRHEINKVICSVCDTEQDVQQNCINCGVCMGKYFCGTCKFFDDDVSKNQYHCDDCGICRTGGKDNFFHCKKCGCCYSKIMEAGHRCVERAMHHNCPVCFEYLFETLRDITVLPCGHTIHLECVKEMERHHRYSCPVCSKSICDMSSLWKKLDQVIASTPMPETYKNKMVWILCNDCGVNSQVQFHVVAHKCLSCNSYNTRQIQGSPATSCSSRVTEMVR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00124 291 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 12 276 - -
Arst3g00124 291 Pfam CHY zinc finger 31 112 IPR008913 GO:0008270
Arst3g00124 291 Pfam RING-type zinc-finger 167 207 IPR027370 -
Arst3g00124 291 Pfam Zinc-ribbon 214 272 IPR039512 -
Arst3g00124 291 ProSiteProfiles Zinc finger CHY-type profile. 24 100 IPR008913 GO:0008270
Arst3g00124 291 SUPERFAMILY Zinc hairpin stack 103 160 IPR037275 -
Arst3g00124 291 SUPERFAMILY CHY zinc finger-like 28 102 IPR037274 GO:0008270
Arst3g00124 291 ProSiteProfiles Zinc finger RING-type profile. 167 210 IPR001841 -
Arst3g00124 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 239 IPR013083 -
Arst3g00124 291 ProSiteProfiles Zinc finger CTCHY-type profile. 102 166 IPR017921 -
Arst3g00124 291 SMART ring_2 167 209 IPR001841 -
Arst3g00124 291 Gene3D - 240 280 - -
Arst3g00124 291 SUPERFAMILY RING/U-box 165 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00124 Arst-Chr3 863053 865129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00124 29 275 C2H2 Transcription Factor Family AT3G18290 40.316 4.33e-56 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00124 K10144 - gmx:100812709 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00124 3 863053 865129 Arst3g00124 3 863053 865129 ECH