Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00097 ATGGCTATTGCTGGTCTGCACAATGTATCTGTACTCGAGTCTTCTTTCCTGAGGGATTCCCATTCCCAGTCATCCAGCAGGCGGGGAGATGGAAGGAGGGGAGGAACCCGGTCATCCGCACTCTTGCAAATGTGGCGAGAGCTTGAAGATGAACATGCGGTGAATCAGGTGCAAGGAAGGCCTGGTGAAGTACTACTTGAACAAAGGAGTGATGGGTTGATTTCTGACCTCTCACAGGCAGATTCTCCAGGTAGCCATGAGAGAGGACAGGATCGAATGCTAGAGGACGCAGTTTTGGGCGACACTGAATCTGAAACATGGTCACAGTCACAAAGTCAGAATGAATCCCATTACGATCATGAGGATTTAAACAACTCCAGCTGTGAAAACTCCTCTGATTTGGGAGAAGTTGAAAGGGGAAGAGTGAGGCAAATTTTTAGGGAATGGATGAGCAGTGGTGCTGGGGATCATGGATCAAACATTTCCCGGAGAAATAACAGTTCAAGGGGAGAATGGCTTGGTGAAACTGAGCAGGAAAGGGTGAGAATAATAAGGGAGTGGGTACAAATGAGTAGCCAGCACAGAGGTGTTTCTTCTGGGGAAACCAGGGAAGAGCAATCTGCTGAAATTGGTACACAAATTGAACGTGTTCGTGACGGCTTTGTTGTTAACCAGGGCGAGGGCCAGACTGAACATTTTCGTAGGGGAATCCGTAAATTATGCGGACGACAGGTTATGCTTGATATGCTGAAGAAGGCTGAGATGCAAAGGCAAAGAGAAATTCAAGAGTTGTTGAACCATCGGGCAGTATCTCATTTCCCCCATCGTAATCGCATTCAGGCATTGCTTAGAGGCTGGTTCTTGAGAAATGATAGATCTGTTGATAATAACAGGTCCACTTCTGTCGCTGAAAGTGAACTAGGTTTATTGAGGCAAAGACAAACTGTATCAGAACTAAGGGAAGGATTCTTCTCTAGGAAGGATAAAACTGGTTGCAGTCAAGCAACTGGCAACGTATCTGATATGTCACCTAACAGTGATATTGAATTTAATACGATTGAACAAACTGGTGCTAGCAATTCACATGTGGTCCCCACTGTGAATTCTGAACGGTCTGAATCTAATACCAGAAGAAATGATGGAGTTGAGATGTTGGGAGGCCAGAATTGTTTGCAGGAAACAATGTCTGACAATCCAGATCAACAAGACACTACTGGTCGTGTAGAAGGAGCTCAGTTACAGGTGCAATTTGAACCAGTAAATCAGCTATCATCCAGTGTGGCCGCTGAAAGAAGAGATAGCACTGGGCAAAATGTTGATGTGAACCGTGTGATGCCAGTTGAGGATACTGCTAGTGATCATGTGCAGCAAAGTTTGCAAACTGAAGATCCATTTCAGAGTGCTATGCCGGAATTCAGTGAGGCATACAATGATCGACTTCGATCGGGTGATATAAGTAATGGTGTAAATGACTCATCAAACCACAACCACCCAATGGAGGAAAATATTGTTGATATGAATCGGAATGAATCCGCTTCTCTGGTAGGAGAACAGCTGGAAGAAGATATTGAAAATGAAGGAAGTGTCTGGAATCAGAGTAACCGTGAATGGAGAAATAGCACCGAGGAAGGTGTAGATGATAATCAAGTCAGCAGTACATCAATGCAGTGGCCTGAAAATGAATTTGGAAATGAGGATGGAGAAAACTCTCGGCTGCAAGAAGGTCCTGAAGTCTGGCAAGAGGATGGTGGCTTCCAAGAGGCTGTAGAAAATTGGTTGGGGGCTCCTTCTGATCTTGAAAGTGCTCCAGTCGGTAGGATTCATGGATTTTACTTTCCAGATGACGACAATGTATATAGTGTTGAACTCAGAGAACTGCTTAATAGGAGAAGTGTCTCCAACCTCCTCCGTAGCAGTTTCCGCGATAGTCTTGACCAGTTGATACAATCATATGTTGTAAGACAAGGCCATAATCAGATGGAGTGGGAGCTACAAGAAACAACCCCGTCTTCTGCCTCTGTGGAACAGGACCTTGAACAGCAGAGTAGGGATCAGATTGTTGGTCAGGAGGGTACTGTTAATAGTCCACATGACCTACCTTCTTTACCTATTCCTCCTCCTTTGCCTCTTTGGGACCGGCACCCTCGCCGTGACAGCTGGTCACAGTCACAGAGTGACATGAATAATCAGCATCTAGGAGGAATTGATTGGGAGGTTGTCAATGACTTGAGAATTGACATGTCTAGGCTGCAGCAAAGGATGAACAATATGCAAAGAATGCTGGAGGCTTGTATGGATATGCAGCTGGAGTTGCAGCGTTCAATAAGGCAAGAAGTTTCTGCTGCCCTAAATCGTTCGACTGGTTCATCAGGAACAAATGAGTTCGAGTCATCAGATGAATCCAAATGGGAATGTGTGAGGAAAGGGCTTTGCTGTATATGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACTTGTGTACATGTTCTAAATGTGCCAATGAGTTGCTTCAAAGTAAAAGGAAGTGCCCGATGTGTCAAGCCCCCGTGGTGGAGGTTATACGTGCTTATTCTATACTATAG 2592 0.4502 MAIAGLHNVSVLESSFLRDSHSQSSSRRGDGRRGGTRSSALLQMWRELEDEHAVNQVQGRPGEVLLEQRSDGLISDLSQADSPGSHERGQDRMLEDAVLGDTESETWSQSQSQNESHYDHEDLNNSSCENSSDLGEVERGRVRQIFREWMSSGAGDHGSNISRRNNSSRGEWLGETEQERVRIIREWVQMSSQHRGVSSGETREEQSAEIGTQIERVRDGFVVNQGEGQTEHFRRGIRKLCGRQVMLDMLKKAEMQRQREIQELLNHRAVSHFPHRNRIQALLRGWFLRNDRSVDNNRSTSVAESELGLLRQRQTVSELREGFFSRKDKTGCSQATGNVSDMSPNSDIEFNTIEQTGASNSHVVPTVNSERSESNTRRNDGVEMLGGQNCLQETMSDNPDQQDTTGRVEGAQLQVQFEPVNQLSSSVAAERRDSTGQNVDVNRVMPVEDTASDHVQQSLQTEDPFQSAMPEFSEAYNDRLRSGDISNGVNDSSNHNHPMEENIVDMNRNESASLVGEQLEEDIENEGSVWNQSNREWRNSTEEGVDDNQVSSTSMQWPENEFGNEDGENSRLQEGPEVWQEDGGFQEAVENWLGAPSDLESAPVGRIHGFYFPDDDNVYSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVVRQGHNQMEWELQETTPSSASVEQDLEQQSRDQIVGQEGTVNSPHDLPSLPIPPPLPLWDRHPRRDSWSQSQSDMNNQHLGGIDWEVVNDLRIDMSRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGTNEFESSDESKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSKRKCPMCQAPVVEVIRAYSIL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00097 863 Coils Coil 740 767 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 155 172 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 539 560 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 359 382 - -
Arst3g00097 863 ProSiteProfiles Zinc finger RING-type profile. 811 850 IPR001841 -
Arst3g00097 863 SUPERFAMILY RING/U-box 810 856 - -
Arst3g00097 863 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 863 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 150 175 - -
Arst3g00097 863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 787 861 IPR013083 -
Arst3g00097 863 MobiDBLite consensus disorder prediction 100 136 - -
Arst3g00097 863 Pfam Zinc finger, C3HC4 type (RING finger) 808 855 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 539 571 - -
Arst3g00097 863 MobiDBLite consensus disorder prediction 16 37 - -
Arst3g00097 863 CDD mRING-HC-C3HC5_NEU1 811 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00097 Arst-Chr3 693891 698769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00097 811 857 C3H Transcription Factor Family AT3G06140 42.553 1.31e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00097 - - gmx:100801329 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00097 3 693891 698769 Arst3g00097 3 693891 698769 ECH
Arst8g01934 8 27838770 27842698 Arst3g00097 3 693891 698769 PCT