Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00076 ATGGAGCAACAAAACCCTCAACAACCCTCTAACCCCATTTTGGACCACACTAGCTCTTTCAACAACAACACTATCGTGCCGAACGAAGCAAAGGTGGCGGCGATGACTGATTCTGGAGGCTCGGACTCGGTGTCAAGACCCGAAGCTGGAGGTTGGGAGCAGCATCATGGAGTGGTGGTTGTGAAGAGGGGGAGAGGGAGACCTCGAAAGTACTTCGACACAGACGGCAGCGGGGGAGGGATGATGACGTCTCTGACGTCAGAGCCGCCGCCTTCGGGGTTTGCGGAAGCGGTAGCGTCCCCACTTGAGAGCCCTGCGGTAAAGAGGGGAAGAGGAAGGCCACGTGGTTCCGGAAAACTGCAGATTCTGGCCTCCATTGGTGGGTTTGTTGTAGAAACAGCTGGTGGAAGCTTCACACCTCATGTGATGATTGTTGGTACTGGAGAGGATGTGGTAAGTAGGATATTGTCATTTTTCCAAAAAGGCCCTCGTGCTGTTTGCATACTTTCAGCTACTGGTTCTGTGTCTAGTGTTGTAATTCGCCAACCTGGTGGTCTATTGAGATATGAGCTTGTTTTGGCCACTTTCAAGCAAAATATCAGCAACCAAATCAAGAAGAGGTACTCATCTGACCCTTCTTCTAATGGTGTCCCCTATACTGCTCCTGCCGCCATCGCTGTCGTGCCGGATATTCCGGATTCCTCAAGGGGTAGCCACAAAGTTCTTAAGTTATCATTACATGAACAGAGTTTCCCTTCACCACCAGGAACAACAAATGCAATTCAAGATGGTGTCACAATTGTAACAACTAATGACATAGCAGATAATGTGATTCCTACAACAACAAATGTGGTGACAAATAATGTCATTGCTGAAGATCTCAACATGCATTCTTCCTCAATCGAGGATGCTATTGACCTTGACCAAACAGCCTCACCAGCAGATGTGGATACTAATTAA 960 0.4833 MEQQNPQQPSNPILDHTSSFNNNTIVPNEAKVAAMTDSGGSDSVSRPEAGGWEQHHGVVVVKRGRGRPRKYFDTDGSGGGMMTSLTSEPPPSGFAEAVASPLESPAVKRGRGRPRGSGKLQILASIGGFVVETAGGSFTPHVMIVGTGEDVVSRILSFFQKGPRAVCILSATGSVSSVVIRQPGGLLRYELVLATFKQNISNQIKKRYSSDPSSNGVPYTAPAAIAVVPDIPDSSRGSHKVLKLSLHEQSFPSPPGTTNAIQDGVTIVTTNDIADNVIPTTTNVVTNNVIAEDLNMHSSSIEDAIDLDQTASPADVDTN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00076 319 Gene3D - 140 208 - -
Arst3g00076 319 SMART AT_hook_2 62 74 IPR017956 GO:0003677
Arst3g00076 319 SMART AT_hook_2 108 120 IPR017956 GO:0003677
Arst3g00076 319 CDD DUF296 139 184 IPR005175 -
Arst3g00076 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 184 - -
Arst3g00076 319 MobiDBLite consensus disorder prediction 1 29 - -
Arst3g00076 319 MobiDBLite consensus disorder prediction 1 50 - -
Arst3g00076 319 Pfam AT hook motif 108 118 IPR017956 GO:0003677
Arst3g00076 319 Pfam AT hook motif 62 73 IPR017956 GO:0003677
Arst3g00076 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 179 IPR005175 -
Arst3g00076 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 190 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00076 Arst-Chr3 524767 533222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00076 61 190 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 48.120 3.73e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00076 - - aip:107632385 507.679