Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00061 ATGAATAACAGAGACAGTGAAACTTCAAACCCTATCGATGGCGGAACAAAGAAGCCCAAGGTGGTTGTTATTACGGGCCCCACCGCCTCCGGCAAGTCCAAGCTCGCCGTCGATCTCGCTTCACACTTTCCCATTGAAGTCATCAACGCCGACTCCATGCAAGTCTACTGTGGTCTCGACGTCCTCACCAACAAGCTCCCTCTCTCCCAACACAAAGGTCTCCCATACTCTCTCTTTACAGCTAAAATGTTTAGGGATTCTGCTATTCCGATCATAGATGAAATACTAGCTCGCAATCACTTGCCTGTTATAGTTGGGGGTACAAATTACTATATCCAGGCTCTTGTGAGTCCATTTCTCCTAGACGATTTGGCAGATGATATGAACGAAGGCTGTTCTGATGATCCATCTGGTGCCACATGGTCTGATACGAGTTTCCCCGCCAATAATGACAATTCAAGTAATGGTTATGACCTGCTTAAAGAGATCGATCCAGTTGCCGCAAATAGAATCCATCCAAATAACCATAGAAAGATCAATCAATATATTAATTTGTATTCACGTACTGGTGTTGTTCCTAGCAAAGTATTCCAAGGAAAAGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGCTGTTTTATGTGTGTGGATGCATCTCTCCCTGTGCTGGACAAATATGTTGAGCAGAGGGTAGACTGTATGTTGGATGCTGGATTACTCAATGAAGTCTATGATGTTTACAACGTGAATGCAGATTATACTAGAGGATTGCGGCAAGCCATTGGTGTCCGAGAATTTGAGCCACTTCTTAGAAGTTGCCTTGTTGAAGACATCTATAAAAGAGAGAAGGAACTGTTAAACGGTTCCAGAATAGAAAAGGGTTTGAAATTGTTTGATGGTAACCTGATGGAGTGGTTGAAATCTTCCTCTGATACTAATACCATAATTCTTTTAGAAGAAGCAATAGAAAAAGTGAAGGTTAATACCCAGAGACTTGTTCGACGACAGAAGAGGATGCTCAATAGGCTGCAAACACTATTTGGTTGGAACATACATTTTGTTGATTCCACAGAGTCAATATCAAGCAAATCAGAGGATGTATGGTCTGACCAAGTGGTTGAGTCAGCTACAAAGGTAGTTAGTTCCTTCTTGTGTGAGAATGGAAGCTTGTCATCCACTTGTGGCATGTCAAATGACACCAACGTGAAAATTAATCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGACAGGGTGCTAAGAGGATTACATGAATGGGAACAACACAAAAAGGGTCGTGGCCACAGGAAACGTATTTCTAGTCTCAAGAGCAAGGCACAAAAGTCTTGGTACCTTGGACAAAATGTTTGA 1392 0.4246 MNNRDSETSNPIDGGTKKPKVVVITGPTASGKSKLAVDLASHFPIEVINADSMQVYCGLDVLTNKLPLSQHKGLPYSLFTAKMFRDSAIPIIDEILARNHLPVIVGGTNYYIQALVSPFLLDDLADDMNEGCSDDPSGATWSDTSFPANNDNSSNGYDLLKEIDPVAANRIHPNNHRKINQYINLYSRTGVVPSKVFQGKAAEKWGQVDNLRYDCCFMCVDASLPVLDKYVEQRVDCMLDAGLLNEVYDVYNVNADYTRGLRQAIGVREFEPLLRSCLVEDIYKREKELLNGSRIEKGLKLFDGNLMEWLKSSSDTNTIILLEEAIEKVKVNTQRLVRRQKRMLNRLQTLFGWNIHFVDSTESISSKSEDVWSDQVVESATKVVSSFLCENGSLSSTCGMSNDTNVKINQRDLWTQYICKACGDRVLRGLHEWEQHKKGRGHRKRISSLKSKAQKSWYLGQNV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00061 463 Hamap tRNA dimethylallyltransferase [miaA]. 21 385 IPR018022 GO:0008033
Arst3g00061 463 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 21 278 IPR018022 GO:0008033
Arst3g00061 463 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 18 388 IPR039657 -
Arst3g00061 463 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g00061 463 Pfam IPP transferase 54 342 - -
Arst3g00061 463 CDD NK 21 79 - -
Arst3g00061 463 Gene3D Classic Zinc Finger 414 458 - -
Arst3g00061 463 FunFam tRNA dimethylallyltransferase 412 455 - -
Arst3g00061 463 Gene3D - 19 413 IPR027417 -
Arst3g00061 463 Gene3D - 147 200 - -
Arst3g00061 463 FunFam LD10347p 144 201 - -
Arst3g00061 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 253 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00061 Arst-Chr3 432161 436914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00061 10 451 C2H2 Transcription Factor Family AT2G27760 54.348 2.78e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00061 K00791 - gmx:100792690 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00061 3 432161 436914 Arst3g00061 3 432161 436914 ECH