Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00042 ATGTACCATCATCATCATCAAGGGAAGAACATCCATTCTTCAAGTTCAAGAATGGCAATGTCTTCTGAGAGGCACATGTTCCTTCAAGCTGCTGGAAATGGGTCCGGGGGTGATTCTGGGCTTGTGCTCTCCACAGATGCCAAGCCTAGACTGAAATGGACACCAGATCTTCATGCCAGGTTCATAGAAGCAGTTCATCAGCTTGGTGGAGCTGACAAGGCAACTCCAAAAACAGTGATGAAACTCATGGGAATTCCCGGGCTTACCTTATACCATCTGAAGAGCCATCTTCAGAAGTACAGACTCAGCAAGAATCTGCAAGGACAAAGTAATAACAACGTGCCTCACAAAATTATATGTCACACAAAACCAGGTGCAAGTAGTGTATCTACGGGAGAAAGACCCTCTGAAAGCAATGGCACTCACAATCATATGAACAACAACACTTTAAACACTATTCCGTCTTCTCCTCAGTCGTCGAATAACAACATAAGTGAGGCACTGCAGATGCAGATAGAGGTGCAAAGAAGGCTAAATGAACAACTAGAGGTGCAAAGACACATGCAGGTGAGGATAGAGGCACAAGGGAAGTACCTGCAAGCAGTGCTGGAGAAAGCTCAAGAAACACTTGGGAAACAGGATTTGGGAGTAGTAGGGCTTGAAGCTGCAAAAGTCCAACTCTCTGAGCTTGTTTCCAAAGTTTCCTCTCAGTGCTTGGAGCTTCAAACCAACAACAACCACTTACCAAATAATAACAATAATGACTGCTCCATGGACAGTAACAGTTGCCTCACATCAGAACAAGAGAATCTAAGGCCCTTCATCAATGGCCACCACCATAAATTCATGTTGGAGAGAAACACCACCACCACCACCACCAACTTTCTGACGCCATTAGGGAGCAAGAACAATAATAGTAACAGTGCTGAGAGAAGAAGCTATGTAGTGGAGAGAAGTCCAAGTAACTTGTCTATGAGCATTGGACTTGAAAGGGAGACAGAAGCAGCGATGATGATGAGTAGTGAGAAAGGTTCTCATCATCATCATCATCATCATCATCAAGATTATACGTTGCCACCTTCTTCTTACTTTTCAGCACCAAGGCTTGACCTTAACGCACGTGATCAGGATCAAAGTCATGAAGCAACTGCTGCAACTTGTAAACAGCTGGACTTGAATGGATTCAGTTGGAGCTAA 1197 0.4428 MYHHHHQGKNIHSSSSRMAMSSERHMFLQAAGNGSGGDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLQGQSNNNVPHKIICHTKPGASSVSTGERPSESNGTHNHMNNNTLNTIPSSPQSSNNNISEALQMQIEVQRRLNEQLEVQRHMQVRIEAQGKYLQAVLEKAQETLGKQDLGVVGLEAAKVQLSELVSKVSSQCLELQTNNNHLPNNNNNDCSMDSNSCLTSEQENLRPFINGHHHKFMLERNTTTTTTNFLTPLGSKNNNSNSAERRSYVVERSPSNLSMSIGLERETEAAMMMSSEKGSHHHHHHHHQDYTLPPSSYFSAPRLDLNARDQDQSHEATAATCKQLDLNGFSWS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00042 398 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g00042 398 Pfam MYB-CC type transfactor, LHEQLE motif 163 209 IPR025756 -
Arst3g00042 398 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Arst3g00042 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Arst3g00042 398 MobiDBLite consensus disorder prediction 293 319 - -
Arst3g00042 398 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Arst3g00042 398 MobiDBLite consensus disorder prediction 338 363 - -
Arst3g00042 398 Pfam Myb-like DNA-binding domain 50 101 IPR001005 -
Arst3g00042 398 MobiDBLite consensus disorder prediction 123 160 - -
Arst3g00042 398 MobiDBLite consensus disorder prediction 124 160 - -
Arst3g00042 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 341 IPR044848 GO:0003700
Arst3g00042 398 Gene3D - 47 106 - -
Arst3g00042 398 FunFam Myb family transcription factor 47 105 - -
Arst3g00042 398 Coils Coil 165 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00042 Arst-Chr3 314782 317959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00042 80 397 G2-like Transcription Factor Family AT3G04030 43.785 4.82e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g00042 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00042 - - gmx:100810396 411.379