Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00036 ATGTTCCCTTCATGGCCAATCAGATTCCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGATGGGATGAAAACACAGACTCAGGATCAGGATCAGGTGTGAACACCAACACCCTTTCAAGCAAATTGGAAACGGAACCCCATCATAATCATTTTGAATCACAAGATTCTCCAATTAGTAGCCAACAACAAGAAGATCAAGAGGTGCAGCTGGCAACTAGTGATGCCTCAAGAAAAGGGCCATCACCCCAACAAAAGAAAAAAGGAGCGAGTTCCACATCAGAGAAGGCAGTGGATGCAAAGACACTGAGACGGTTGGCACAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTGTAGCAGATTAAAGCTTACTCAGCTGGAAAAGGAGGTAGAAAGAGCAAGATCACAGGTATCAGGAACAGGAGGAGGAGGAGGAGCAATGATGTTTGACATGGAATATGGAAGATGGCTGGAAGATGAAGAGAGGCAGATGGGGGAGGTGAGGAGGGGGCTGGAGGGGGGAATATCGGACGGGGAGATGAGAGTGATAGTGGAGAGTTACATGAGCCACTACGACGAACTCTTCAGGCTGAAGGCGGAGGGTGCCAAGTGGGACGTGTTCCACATCATGAATGGCACATGGACATCCCCCGCAGAGAGGTGCTTCCTGTGGATGGGTGGTTTCAGGCCGTCAGACCTGGTGGGACTGCTGATACACCAGTTGGAGCCTCTTGCGGAGCAGCAGATCATAGCCATGTACGGACTGAGACACTCATCCCAGCAGGCTGAAGACGCTCTTTCTCAGGGGCTTGAGCAGCTCCACCACTCTCTCCTCCACACCATCTCCCTCCCTCAGATGCTTTCTGCCATGGCCAAGCTTTCCAACCTTGAAGCTTTCCTCCTTCAGGCTGATCATCTGAGGCAGCAAACTCTTCACCAATTCTGTCGATTTCTCACCATTCGTCAAGCAGCTCGCTGTTTCCTTGTCATTGGAGACTACTATGCTCGTCTTCGCGCCCTTAGTTCTCTTTGGGCCTCCAGGACCCTCATCAACAATCATCACGATAACTCATCCATCGACTTGCAAACGCAAAATCATTTCTCTAATTTCTGA 1146 0.5 MFPSWPIRFHQTSRGGCKSGGWDENTDSGSGSGVNTNTLSSKLETEPHHNHFESQDSPISSQQQEDQEVQLATSDASRKGPSPQQKKKGASSTSEKAVDAKTLRRLAQNREAARKSRLRKKAYVQQLECSRLKLTQLEKEVERARSQVSGTGGGGGAMMFDMEYGRWLEDEERQMGEVRRGLEGGISDGEMRVIVESYMSHYDELFRLKAEGAKWDVFHIMNGTWTSPAERCFLWMGGFRPSDLVGLLIHQLEPLAEQQIIAMYGLRHSSQQAEDALSQGLEQLHHSLLHTISLPQMLSAMAKLSNLEAFLLQADHLRQQTLHQFCRFLTIRQAARCFLVIGDYYARLRALSSLWASRTLINNHHDNSSIDLQTQNHFSNF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00036 381 PANTHER TRANSCRIPTION FACTOR TGA9 48 359 - -
Arst3g00036 381 Coils Coil 120 147 - -
Arst3g00036 381 MobiDBLite consensus disorder prediction 23 43 - -
Arst3g00036 381 SUPERFAMILY Leucine zipper domain 101 146 IPR046347 GO:0003700|GO:0006355
Arst3g00036 381 MobiDBLite consensus disorder prediction 1 103 - -
Arst3g00036 381 Pfam bZIP transcription factor 100 142 IPR004827 GO:0003700|GO:0006355
Arst3g00036 381 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 143 IPR004827 GO:0003700|GO:0006355
Arst3g00036 381 FunFam BZIP family transcription factor 100 150 - -
Arst3g00036 381 Gene3D - 100 151 - -
Arst3g00036 381 SMART brlzneu 97 150 IPR004827 GO:0003700|GO:0006355
Arst3g00036 381 Pfam Seed dormancy control 174 248 IPR025422 GO:0006351|GO:0043565
Arst3g00036 381 MobiDBLite consensus disorder prediction 54 91 - -
Arst3g00036 381 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Arst3g00036 381 ProSiteProfiles DOG1 domain profile. 157 358 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00036 Arst-Chr3 289624 292263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00036 39 381 bZIP Transcription Factor Family AT1G08320 55.707 4.97e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst3g00036 DOG1 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00036 K14431 - gmx:100101904 451.055