Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00035 ATGTTCCCTTCATGGCCAATCAGATTCCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGATGGGATGAAAACACAGACTCAGGATCAGGATCAGGTGTGAACACCAACACCCTTTCAAGCAAATTGGAAACGGAACCCCATCATAATCATTTTGAATCACAAGATTCTCCAATTAGTAGCCAACAACAAGAAGATCAAGAGGTGCAGCTGGCAACTAGTGATGCCTCAAGAAAAGGGCCATCACCCCAACAAAAGAAAAAAGGAGCGAGTTCCACATCAGAGAAGGCAGTGGATGCAAAGGTGAAGACACTGAGACGGTTGGCACAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTGTAGCAGATTAAAGCTTACTCAGCTGGAAAAGGAGGTAGAAAGAGCAAGATCACAGGTATCAGGAACAGGAGGAGGAGGAGGAGCAATGATGTTTGACATGGAATATGGAAGATGGCTGGAAGATGAAGAGAGGCAGATGGGGGAGGTGAGGAGGGGGCTGGAGGGGGGAATATCGGACGGGGAGATGAGAGTGATAGTGGAGAGTTACATGAGCCACTACGACGAACTCTTCAGGCTGAAGGCGGAGGGTGCCAAGTGGGACGTGTTCCACATCATGAATGGCACATGGACATCCCCCGCAGAGAGGTGCTTCCTGTGGATGGGTGGTTTCAGGCCGTCAGACCTGGTGGGACTGCTGATACACCAGTTGGAGCCTCTTGCGGAGCAGCAGATCATAGCCATGTACGGACTGAGACACTCATCCCAGCAGGCTGAAGACGCTCTTTCTCAGGGGCTTGAGCAGCTCCACCACTCTCTCCTCCACACCATCTCCCTCCCTCAGATGCTTTCTGCCATGGCCAAGCTTTCCAACCTTGAAGCTTTCCTCCTTCAGGCTGATCATCTGAGGCAGCAAACTCTTCACCAATTCTGTCGATTTCTCACCATTCGTCAAGCAGCTCGCTGTTTCCTTGTCATTGGAGACTACTATGCTCGTCTTCGCGCCCTTAGTTCTCTTTGGGCCTCCAGGACCCTCATCAACAATCATCACGATAACTCATCCATCGACTTGCAAACGCAAAATCATTTCTCTAATTTCTGA 1152 0.5 MFPSWPIRFHQTSRGGCKSGGWDENTDSGSGSGVNTNTLSSKLETEPHHNHFESQDSPISSQQQEDQEVQLATSDASRKGPSPQQKKKGASSTSEKAVDAKVKTLRRLAQNREAARKSRLRKKAYVQQLECSRLKLTQLEKEVERARSQVSGTGGGGGAMMFDMEYGRWLEDEERQMGEVRRGLEGGISDGEMRVIVESYMSHYDELFRLKAEGAKWDVFHIMNGTWTSPAERCFLWMGGFRPSDLVGLLIHQLEPLAEQQIIAMYGLRHSSQQAEDALSQGLEQLHHSLLHTISLPQMLSAMAKLSNLEAFLLQADHLRQQTLHQFCRFLTIRQAARCFLVIGDYYARLRALSSLWASRTLINNHHDNSSIDLQTQNHFSNF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00035 383 MobiDBLite consensus disorder prediction 1 101 - -
Arst3g00035 383 Pfam bZIP transcription factor 100 144 IPR004827 GO:0003700|GO:0006355
Arst3g00035 383 MobiDBLite consensus disorder prediction 23 43 - -
Arst3g00035 383 ProSiteProfiles DOG1 domain profile. 159 360 IPR025422 GO:0006351|GO:0043565
Arst3g00035 383 FunFam BZIP family transcription factor 102 152 - -
Arst3g00035 383 Gene3D - 102 153 - -
Arst3g00035 383 SMART brlzneu 99 152 IPR004827 GO:0003700|GO:0006355
Arst3g00035 383 Pfam Seed dormancy control 176 250 IPR025422 GO:0006351|GO:0043565
Arst3g00035 383 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 106 121 IPR004827 GO:0003700|GO:0006355
Arst3g00035 383 SUPERFAMILY Leucine zipper domain 103 148 IPR046347 GO:0003700|GO:0006355
Arst3g00035 383 Coils Coil 122 149 - -
Arst3g00035 383 PANTHER TRANSCRIPTION FACTOR TGA9 48 361 - -
Arst3g00035 383 MobiDBLite consensus disorder prediction 54 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00035 Arst-Chr3 289624 292273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00035 39 383 bZIP Transcription Factor Family AT1G08320 55.405 3.60e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst3g00035 DOG1 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00035 K14431 - gmx:100101904 446.047