Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00005 ATGACTGATGCTTCATTTGAGAGTGAGACGGAGTATTACACCCCAAACCATCACAAACGATACTATCCAACGCCAGTAAGCCATCACAACGTCTTTGGCTCGGAGTCTTTCACAATGTCCACCTCTCAAACTCAACGCAAAGCCGCCAGCTCTAGAAGAGCTCGCCCCAACAGAATTCCCACGACGCCTTTCGCTTCGGACGATGATCATTCGTGGCAAGGAGAGGTTTCTTGGAAGTTCGAGGCCAGCAGGGGATGGCAAGAGTACAGCGCACGCATGGGCTCTGTTCTGAATCCATGGCCAGTCGACTCCCCATTTGAACACAGCCGCGTGTTTCGTCAGTCGGCCAATGACTACTTCCTTTCACAAACTAGTCGATTCAAAGGCCACTCAGGCTCAACTTATCATAATGAGCATTCCGTCTACGGAAGAGTTGAGCTCCAGAGCTATGTTGCCGGGGACAGTGACCTTAGCGAGTCTCGTGGTTTCTCTAAAACGAAGGTCATAAAAGAAAGAGATAGCATAATAAGAAACAAGACTAGTCCGTTGGCCGAAGAAGACGAGCTCAGTTGGATAGACTATAGCATCTCTGATAAAGAAATCGGTGGGTATCACGCTAAATTCTCTTATATTAAACATGACCACCGTGGCAAGCATGGCGATAGTTACGGACTACCATCAGCCGGAGATAAATTCGGTACCCCGAGTTATGGTGTTGACAAGGTTCCAGGGTATGAGTATGATGAAGAGGGCGAGGAGGAATTGGACGAGGAAGATGCAGGGCCTCCAAAGACAATTGGGTTGTTTCGGCTATTTAGGTATGCAACAAAGTGGGATTGGGTTCTTGTGCTTGTAGGTTGTTTAGGTGCTTTCATAGATGGAGGCTCACTTCCTTTTTATTCTTATCTTTTTGGAGAATTGGTCAATAAGATTTCACAAAATGGGAATAATAAGCAAATGATGAAGGATGTAGAGAAGATATGCATATATATGACCGGGTTGGCTGCAGTTGTTTCGGTTGGAGCATATTTGCAGATCGCATGTTGGAGGTTAGTGGGCGAGAGATCTGCTCAAAGAATGAGGACGGAGTATTTAAGAGCAGTTCTTCGACAGGATATTAGCTTTTTTGATACACAGATCAACACTGGTGACATTATGCATGGAATAGCAAGTGATGTTGCACAAATCCAAGAAGTTATGGGAGAGAAGATGGCTCACTTTGTTCATCATATATTTACATTTATATGTGGCTACATAGTTGGATTTAGAAGATCATGGAGAGTCTCTTTGGTGGTATTCTCAGTCACCCCATTAACAATGTTTTGTGGTATAGTCTACAAAGCAATTTATGGTGGTCTAACAGCAAAAGAAGAAGCTTCTTACAGGAAAGCTGGTGTTATTGCGGAACAAACGATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCGGAAAGGCAATTGGCAGCAAAATATGCTCAATTACTACAAAAATCAGCCCCAATCGGCGCAAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGCATTATCTATTTAGTAACATATTCGACATGGGCCTTGGCATTTTGGTATGGCTCCATCTTAATTGCCACGAACAAACTTGATGGGGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGAGGTCTAGCATTGGCGCTGTCATATTTTGCACAATTTGCACAAGGTACAGTTGCAGCAAGTCGTGTATTCTCTATTATAGACAGAATTCCTGAGATTGATCCATATAGCCCTGACGGAAGGAAGCTTACTGTTGTCCGTGGTAGAATTGAGTTAAAAAATGTTAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAATTTAGTATTTTCATCGACAAAAACTTTGGCACTCGTTGGTGCTAGTGGAGGGGGAAAAACCTACCTAGGGAAATTTATCATTGTGCTTTCTTTCAATATTATCCTTGTAGGGACGATAACCTTGGACGGGCATGATTTGAGGACGTTGCAAGTCAAGTGGCTAAGAGGTCAAATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCAACCTCCATACTAGAAAACGTTATGATGGGGAAAGATAATGTCACTAAGGAGGAGGCAATTGCTGCTTGCATTGCTGCAGATGCTCACAATTTCATATCTAACTTACCACTTGGCTATGACACTCAGGTCGGAGATAGGGGCACAAAACTATCAGGTGGTCAAAAGCAGAGAATCGCACTGGCTCGAGCAATAATCAAAGATCCTAAAATCCTTCTTTTAGACGAACCTACCAGCGCTCTTGATGCTGAGTCAGAGTCTGCAGTGCAACGAGCCATCGACAAGATTTCTGTGGGTCGAACAACCATTGTCATTGCTCATAGGATAGCTACTGTAAAGAATGCTCATGCCATCGTGGTCCTCGAAAATGGTACTGCCATTGAGATGGGTAACCATCTCCAGCTTATAGGGAAAGGGGGAACCTACTATAACCTTGTCAAACTCGCCACCGAGGCCATATCAAGGCCTCTCTCTAATGAACATGACATGCAAAAATCCAATGATCTTTCCATCTATGACAACTCAATTGCTGATGTATCAAGATATGCAGCAGATATCTCGAGGCCTAAACATTTAAAATACGCTCAGGAGAAAAAAGTAGAGATCGAAGACGAGCCAAACAAAATGCCAACAAAATTTAGACTTTCTGAGATATTGAAATTGCAAAAGCCAGAGCTTTGGATGCTACTTTTAGGATTCTTTCTGGGTATGTTTGCAGGCGCTTTTCTGTCTCTTTTTCCTTTGGTTTTAGGCATATCTCTTGGGGTATATTTTGATGATGACACTGATAAGATGAAGAGAGATGTTGGACACCTTTGTTTAGCACTTGTTTGTCTTGGATTCGGTTGTATTCTTTCCATGACAGGACAACAAGGATTTTGTGGTTGGGCAGGATCAAAGCTTACACTAAGGGTTAGAAACCTCTTGTTCCAGTCCATCTTGAAACAAGAACCTGGGTGGTTTGATTTTGATAAAAACTCGACTGGAGTGTTAGTGTCAAGGCTCTCCATTGATTGTATCAGCTTTCGTTCAATACTTGGTGATCGATTCTCAGTCCTTCTTATGGGGATGAGTTCAGCAGCTGTCGGTCTTGGTGTTTCCTTTGTCATCAATTGGAAACTAACCCTTTTGGCGGCTGCTGTTACTCCCTTTACTCTTGGTGCAAGTTATGTAAGCTTGCTTATAAATATTGGGCCACATGTTGATAACAATGCATATGCCAAAGCTAGCAATATTGCTTCTGGTGCAGTATCAAACATAAGAACGGTTACCACTTTTTCTGCCCAGGAAATATTAATTAAGTCCTTTGATCAAGCCTTATCAGAACCTCAAAGGAAATCATTGAAAAGTTCGCACATTCAAGGTCTAACATTTGGGTTCTTTCAAGGAGCCATGTATGGAGCGTACACCTTGGTTCTTTGGTTTGGTGCCAGACTTGTAGATCGTAGCGAAGCGAAGTTCGGAGATGTTTTTAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAACACCGGATACTTCTATGGCGGCCACAGCAATCCCTTCTGTTCAAGATATCATAAACCGGAGGCCGCTGATAGGCAACGATAAGTCAATAAGAAGCAAGAAAGTAGAAGATCGATTAAAGTCGCCTTTCAAAATAGAATTCAAAATGGTCACATTTGCATACCCATCTAGGCCTGCAGTTACAGTGCTAAGGGATTTCTCTTTGAAGGTCAAAGGTGGAAGCACCGTGGCCTTGGTAGGACCCAGTGGATCAGGAAAATCAACCATCATATGGTTGATACAGAGGTTCTATGATCCAAATAAAGGAAAAGTGATGCTAAGTGGGGTAGACCTTATGGAAATTGATGTTAAGTGGTTAAGGAGGCAAATGGCTTTAGTAGGTCAAGAACCAGCACTGTTTTCTGGGAGTATAAGGGAGAACATTACCTTTGGGGACCCAAATGCGTCATGGGCTGAAATTGAAGCAGCTGCAAAAGAAGCTTACATCCACAAATTCATTAGTGGCCTTCCTCAAGGTTATGAGACCCAGGTTGGTCAAAGCGGGGTCCAACTATCAGGTGGCCAAAAACAAAGAATTGCAATAGCAAGGGCTATACTGAAGAAATCAAGGGTGATTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAGTCAGAGAAACACATCCAAGATGCCCTTAAGAAAGTTTCCAATGAAGCAACAACCATCATTGTAGCCCATCGTCTATCGACAATTAGAGAAGCTGACAAGATAGTGGTTATGAAAGATGGGGGAGTAGCAGAGTATGGAAGTCATGACACACTGATGACTTCCCATCAAAATGGTCTGTATGCTAGCCTAGTTCGTTCTGAGACCGAAGCCAATGCCTTTGCTTGA 4494 0.4301 MTDASFESETEYYTPNHHKRYYPTPVSHHNVFGSESFTMSTSQTQRKAASSRRARPNRIPTTPFASDDDHSWQGEVSWKFEASRGWQEYSARMGSVLNPWPVDSPFEHSRVFRQSANDYFLSQTSRFKGHSGSTYHNEHSVYGRVELQSYVAGDSDLSESRGFSKTKVIKERDSIIRNKTSPLAEEDELSWIDYSISDKEIGGYHAKFSYIKHDHRGKHGDSYGLPSAGDKFGTPSYGVDKVPGYEYDEEGEEELDEEDAGPPKTIGLFRLFRYATKWDWVLVLVGCLGAFIDGGSLPFYSYLFGELVNKISQNGNNKQMMKDVEKICIYMTGLAAVVSVGAYLQIACWRLVGERSAQRMRTEYLRAVLRQDISFFDTQINTGDIMHGIASDVAQIQEVMGEKMAHFVHHIFTFICGYIVGFRRSWRVSLVVFSVTPLTMFCGIVYKAIYGGLTAKEEASYRKAGVIAEQTISSIRTVFSFVAERQLAAKYAQLLQKSAPIGAKIGFAKGAGMGIIYLVTYSTWALAFWYGSILIATNKLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFSIIDRIPEIDPYSPDGRKLTVVRGRIELKNVSFAYPSRPDSLILHSLNLVFSSTKTLALVGASGGGKTYLGKFIIVLSFNIILVGTITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNVTKEEAIAACIAADAHNFISNLPLGYDTQVGDRGTKLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESAVQRAIDKISVGRTTIVIAHRIATVKNAHAIVVLENGTAIEMGNHLQLIGKGGTYYNLVKLATEAISRPLSNEHDMQKSNDLSIYDNSIADVSRYAADISRPKHLKYAQEKKVEIEDEPNKMPTKFRLSEILKLQKPELWMLLLGFFLGMFAGAFLSLFPLVLGISLGVYFDDDTDKMKRDVGHLCLALVCLGFGCILSMTGQQGFCGWAGSKLTLRVRNLLFQSILKQEPGWFDFDKNSTGVLVSRLSIDCISFRSILGDRFSVLLMGMSSAAVGLGVSFVINWKLTLLAAAVTPFTLGASYVSLLINIGPHVDNNAYAKASNIASGAVSNIRTVTTFSAQEILIKSFDQALSEPQRKSLKSSHIQGLTFGFFQGAMYGAYTLVLWFGARLVDRSEAKFGDVFKIFLILVLSSFSVGQLAGLTPDTSMAATAIPSVQDIINRRPLIGNDKSIRSKKVEDRLKSPFKIEFKMVTFAYPSRPAVTVLRDFSLKVKGGSTVALVGPSGSGKSTIIWLIQRFYDPNKGKVMLSGVDLMEIDVKWLRRQMALVGQEPALFSGSIRENITFGDPNASWAEIEAAAKEAYIHKFISGLPQGYETQVGQSGVQLSGGQKQRIAIARAILKKSRVILLDEASSALDLESEKHIQDALKKVSNEATTIIVAHRLSTIREADKIVVMKDGGVAEYGSHDTLMTSHQNGLYASLVRSETEANAFA 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00005 1497 Gene3D ABC transporter type 1, transmembrane domain 240 319 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 Gene3D ABC transporter type 1, transmembrane domain 1098 1246 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 PANTHER ABC TRANSPORTER B FAMILY 248 844 IPR039421 -
Arst3g00005 1497 PANTHER ABC TRANSPORTER B FAMILY 248 844 IPR039421 -
Arst3g00005 1497 CDD ABC_6TM_Pgp_ABCB1_D1_like 284 579 - -
Arst3g00005 1497 CDD ABC_6TM_Pgp_ABCB1_D2_like 915 1230 - -
Arst3g00005 1497 Pfam ABC transporter transmembrane region 284 552 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g00005 1497 Pfam ABC transporter transmembrane region 925 1196 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g00005 1497 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524|GO:0016887
Arst3g00005 1497 Pfam ABC transporter 624 775 IPR003439 GO:0005524
Arst3g00005 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1247 1488 IPR027417 -
Arst3g00005 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 926 1212 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g00005 1497 CDD ABC_MTABC3_MDL1_MDL2 1251 1488 - -
Arst3g00005 1497 MobiDBLite consensus disorder prediction 37 71 - -
Arst3g00005 1497 Gene3D - 604 864 IPR027417 -
Arst3g00005 1497 Gene3D - 1249 1491 IPR027417 -
Arst3g00005 1497 Gene3D - 604 864 IPR027417 -
Arst3g00005 1497 Gene3D - 1249 1491 IPR027417 -
Arst3g00005 1497 SMART AAA_5 1278 1464 IPR003593 GO:0016887
Arst3g00005 1497 SMART AAA_5 633 836 IPR003593 GO:0016887
Arst3g00005 1497 ProSitePatterns ABC transporters family signature. 1390 1404 IPR017871 GO:0005524|GO:0016887
Arst3g00005 1497 FunFam ABC transporter B family member 1 1241 1491 - -
Arst3g00005 1497 FunFam Multidrug resistance protein 1A 596 846 - -
Arst3g00005 1497 SUPERFAMILY ABC transporter transmembrane region 913 1228 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 Pfam ABC transporter 1269 1417 IPR003439 GO:0005524
Arst3g00005 1497 SUPERFAMILY ABC transporter transmembrane region 263 591 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1099 1239 - -
Arst3g00005 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1487 IPR003439 GO:0005524
Arst3g00005 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 606 844 IPR003439 GO:0005524
Arst3g00005 1497 Gene3D ABC transporter type 1, transmembrane domain 328 1089 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 844 IPR027417 -
Arst3g00005 1497 Gene3D ABC transporter type 1, transmembrane domain 328 1089 IPR036640 GO:0005524|GO:0016020
Arst3g00005 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00005 Arst-Chr3 49632 62453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00005 956 1497 Calmodulin-binding Proteins AT2G36910 36.765 1.22e-99 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00005 K05658 - gmx:100816700 2134.38