Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03799 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAGAACACCGAAGATGAGATCCTGAAAGCAGCTGTTATGAAATATGGCAAGAACCAATGGGCTCGAATCTCTTCCCTTTTGGTTCGTAAATCTGCTAAGCAATGCAAGGCTCGCTGGTACGAATGGCTCGATCCTTCCATCAAGAAGACTGAGTGGACTAGAGAAGAGGATGAGAAGCTGCTTCATCTTGCTAAGCTTATGCCCACGCAGTGGAGAACGATTGCTCCTATTGTAGGACGTACTCCTTCTCAGTGTCTTGAGCGCTACGAGAAGCTCCTTGACGCAGCCTGTGTTAAAGATGAGAACTATGAACCCGGCGATGATCCTCGGAAGTTGCGTCCTGGGGAGATTGATCCAAATCCAGAGTCAAAACCTGCACGCCCAGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCCGAAGCACGAGCCCGATTAGCGAACACAAAAGGAAAGAAGGCGAAAAGGAAAGCGAGGGAGAAACAGCTTGAGGAAGCCAGAAGACTTGCTTCTTTACAAAAGAAGAGAGAATTGAAGGCTGCGGGAATTGATGTCAGGCATCGAAGGAGAAAAAGGAAAGGCATTGACTATAATGCAGAAATCCCTTTTGAGAAAAGGCCTCCTCCTGGTTTTTTTGACGTTGCTGATGAAGACAGACCCGTGGAACAGCCCCAGTTCCCTACTACAATAGAAGAACTTGAGGGTAAAAGAAGGATTGATGTTGAGACACAGTTAAGAAAGCAAGACATTGCAAAAAATAAAATTGCACAGAGGCAAGATGCCCCATCTGCTATACTACATGCCAATAAGTTGAATGATCCGGAAACAGTACGGAAACAAACCAAACTGATGCTTCCGCCACCCCAGATTTCTGACCAGGAACTGGATGAAATTGCAAGGATGGGTTATGCCAATGACCTAGCTGAGAGTGATGAGTTTGGAGAAGGTAGTGCTGCAACACGTGCTCTTCTAGCGAATTATGCACAAACACCTGGCCGGGGAATGACTCCTTTACGAACCCCTCAGCGATCACCGGCTAGTAAAGGAGACGCTGTCATGATGGAAGCTGAAAACCTGGCGAGGTTGAGGGAGTCCCAGACACCATTATTAGGGGGAGAAAACCCAGAGTTGCATCCTTCAGATTTTACTGGGGTCACTCCCAAGAGAAAAGAGGTTCAGACCCCAAATCCAATGTTGACTCCCTCTGCAACTCCTGGAGTTGCAGGTCTCACTCCCAGAATTGGCATGACACCTGCAAGAGATGGTTATGCTAGCATGACACCTAAGGGAACTCCTCTCAGGGATGAGCTTCATATTAATGAGGATGTGGATATGCATGAGCGCGCTAAACTTGAGCTACAAAGAGCTGAAATAAGACGAAGTCTGCGCTCTGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATTGTCATGCAGCCCATTCCAGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCAGATAGAATAGCTAGAGAAATGGCAGAAGAAGAGGCAAGGCAACAGGCGTTACTTAGGAAACGATCAAAAGTCCTTCAAAGGGAGCTTCCTCGGCCTCCAGCTGCATCGTTGGAGCTTATAAGAAATTCTGTGATCAGAGCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCAATTGAGCAAGCTGATGAGATGATAAGAAGGGAGCTTCTTGCTTTGCTGGAGCATGACAATGCTAAGTATCCGCTTGATGAGAAAGTAAATAAGGAGAAAAAGAAAGGAGCTAAGCGTGTGGTGAATGAGCCTGTTGTTCCTGTTATAGAAGAATTTCATGAAGAGGAGATGAAAGATGAAAAAGAAATACCAAAAAGCGAGGAGGGGACCAGGGTTCCCATATACAAAAGCAAAACACAAACAAAGGCCTATCTAAAATGTAAAGCTCTCCAATCTCTCAACATGTGCGAGAGGGAAAGACCTCTAAAAAGATCTTCAGCTTTACACCAGGATGCTAAGTGTCTAGTCCTATCCCATAAGATATGTTTATCAGAGAATCTGTCACTAAAGGCTGATAAGTTGATAAAGGATGAGGCCCATTATCTTCGGGTAGCACTGGGACATGAAAGTGAACCCCTTGAGGAATTCATTGAAGCACACAGGACTGGCCTGAATGATCTCATGTTCTTTCCAACCCGTAATGCCTATGGTCTCTCAAGTGTTGCTGGAAACATGGAAAAGCTGGCAGCTTTGCAGAACGAGTTTGAGAATGTGAGGAAAAAGTTGGACCAAGGCAAGGAGAAAGTTGTAAAGCTCGAGAAGAAGGCAATACTCCTCACTCAAGGCTATGAGATGAGAGCCAAAAACAGTCTTTGGCCACAAATTGAGGCCACTTCCAAGCAAATGGACATAGCTGCAACCGAATTAGAATGCTTTGAAGCTTTGCAAAAGCAGGAGAAGTTAGCAGCATCCCACAGGATAAACAATCTATGGGAGGAAGTACAGAAGCAAAAGGAACTTGAGAGAACTTTGCAATACAAGTATGGGAGTCTTATGGAAGAAGTGGAAAGGATACAAAATGTCATGGAACAGTACAGGGTACAAGCACAAAAGCAAGAAGAAATCGAAGCAAACAATCGTGCTCACGAGTCAACAGAGACTGTTGCTGACAAAACTGGTGCACAGGATTCAGAGAGTTTTAAAGCTGCTCCTCTCACTGAAGAAAATGAAACTGCTATAGCAACTGCTTTGTCTCATGATGAAAGTGAAGCGGGCACTGTGCGAGACCAGACTACCGCTAGCCAGAAAAATGACGTGGATGTGGATTCTGATGATATAAAGCAAACAGATGACCCTAATGCAAAACCGCCAGATGCTGCACTTGCTGCCAAGGCTGACGCCGGAAAAGTGGAAGGTACCATCACTGATGGTCACATTGATAACGGTAAGACAGCATTAGACTAG 2994 0.4532 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRHRRRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPQFPTTIEELEGKRRIDVETQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKQTKLMLPPPQISDQELDEIARMGYANDLAESDEFGEGSAATRALLANYAQTPGRGMTPLRTPQRSPASKGDAVMMEAENLARLRESQTPLLGGENPELHPSDFTGVTPKRKEVQTPNPMLTPSATPGVAGLTPRIGMTPARDGYASMTPKGTPLRDELHINEDVDMHERAKLELQRAEIRRSLRSGLGSLPQPKNEYQIVMQPIPEDAEEPEEKIEEDMSDRIAREMAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSVIRADGDKSSFVPPTSIEQADEMIRRELLALLEHDNAKYPLDEKVNKEKKKGAKRVVNEPVVPVIEEFHEEEMKDEKEIPKSEEGTRVPIYKSKTQTKAYLKCKALQSLNMCERERPLKRSSALHQDAKCLVLSHKICLSENLSLKADKLIKDEAHYLRVALGHESEPLEEFIEAHRTGLNDLMFFPTRNAYGLSSVAGNMEKLAALQNEFENVRKKLDQGKEKVVKLEKKAILLTQGYEMRAKNSLWPQIEATSKQMDIAATELECFEALQKQEKLAASHRINNLWEEVQKQKELERTLQYKYGSLMEEVERIQNVMEQYRVQAQKQEEIEANNRAHESTETVADKTGAQDSESFKAAPLTEENETAIATALSHDESEAGTVRDQTTASQKNDVDVDSDDIKQTDDPNAKPPDAALAAKADAGKVEGTITDGHIDNGKTALD 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03799 997 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Arst2g03799 997 MobiDBLite consensus disorder prediction 380 446 - -
Arst2g03799 997 MobiDBLite consensus disorder prediction 885 899 - -
Arst2g03799 997 Coils Coil 167 187 - -
Arst2g03799 997 SMART sant 58 105 IPR001005 -
Arst2g03799 997 SMART sant 6 55 IPR001005 -
Arst2g03799 997 MobiDBLite consensus disorder prediction 885 997 - -
Arst2g03799 997 Coils Coil 751 785 - -
Arst2g03799 997 Gene3D - 60 114 - -
Arst2g03799 997 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Arst2g03799 997 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 698 872 IPR047242 GO:0000398|GO:0000974
Arst2g03799 997 FunFam CDC5 cell division cycle 5-like 60 120 - -
Arst2g03799 997 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 698 872 IPR047242 GO:0000398|GO:0000974
Arst2g03799 997 MobiDBLite consensus disorder prediction 948 962 - -
Arst2g03799 997 Coils Coil 858 885 - -
Arst2g03799 997 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Arst2g03799 997 MobiDBLite consensus disorder prediction 113 150 - -
Arst2g03799 997 CDD SANT_CDC5_II 55 106 IPR047240 -
Arst2g03799 997 MobiDBLite consensus disorder prediction 399 413 - -
Arst2g03799 997 Gene3D - 5 59 - -
Arst2g03799 997 Pfam pre-mRNA splicing factor component 406 635 IPR021786 -
Arst2g03799 997 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Arst2g03799 997 Pfam Myb-like DNA-binding domain 10 70 - -
Arst2g03799 997 CDD SANT 10 53 IPR001005 -
Arst2g03799 997 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Arst2g03799 997 FunFam CDC5 cell division cycle 5-like 5 59 - -
Arst2g03799 997 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03799 Arst-Chr2 93769371 93776875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03799 1 894 MYB-Related Transcription Factor Family AT1G09770 69.333 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst2g03799 Myb_Cef 2.9e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03799 K12860 - gmx:100790369 1368.21