Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03769 ATGGAGACTGAAGCTCCTGAAGACAGAGAGGATAACAGAGCTGATGACGACACAATCGAAAAGGGTCCAGAATCATCTGAAATAACTGAGGAACTCTCAAATAGACGACATGGGACTAGGAAAAGCCTCATCTTGGAGATTCCAACAACAAGCACTGTGGATGAAGATTTTGTGAGGATAAACATGCCTCTAACTCCTCCTCCAAGAAAAGTGGCCTTTTCACCATGTCCAAGCCCTTCAGCATCAAGGAATAGATCAACTATGAAAACTTTATTTCCCAAACTCACTTTAAAAATCAGGAGCACAAGCTCACAGCAGATCGAAAATGCTGCTTTTCTTGCACTCGAAGGTTCACCAAAGGTGGCACCAAAGAAGCCTCTTCTTCCGAGGACATTTTCACTTACAAAGTTGATCACCCCTAGAGGGAAGAACACGGCATCCTTGCCTGTAACACCGATTGCTCACTCTAATCCAGGGTCCACACATGGAGGAAATGCTGCTTATCTAGCTTCAATTGATAAAGGGATCCAATTACCAATGCATCGTTCTCGTTCAGTTCCAATACTTAACAAGGCAGGGAGCACAAGTGTAGGTGGAATGTTTCGTATAATTCCAACCACACCAACATCAGCGACATCTCCATCTGGTGATAGTGTTGAGAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGGGAAGGTGCTGATGATACTCTTAAATTGGAGTGTAGTTGCAAAGGTGAACTTTCACTGGCTCACCAACAATGTGCAGTTAAATGGTTTAGCATTAAAGGAAACAGAACATGTGATGTTTGCAAGCAAGAAGTTAAGAACTTACCTGTGACTCTCTTGCGGCTTCAAACTGCACCTAGAGGGCAGCATGCTGAGATTTCTCAAACAAGGGTTTGGCAGGATGCTCCCATTCTTGTAGTTGTCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTATGGGCTCTGGTGCTGTTGCCATGTCTCTTCCATTTTCTTGTATACTTGGTCTTCTTGGTAGCATGACATCTACAACAATGGTGAGGAGAAATCATGTTTGGGTTTATGCAACTGTGCAGTTTGTTCTGGTGGTTGTCAGTGGACACCTTTTCTATTCATTGGTTCATATGCAAGCTGTTCTAGCTATTTTGCTTGCCACATTTACTGGCTTTGGGGCTGTGATGTTTGTAGCTTCTGTTCTTGCTGAGATATCAAATTGGAGGAGAATAAGTCTTGGTCAGTTGAATCAAGAGGAGGCAGTGGCACCTGATCAATCTGAGGCTCCTGAAAGTAATTTGAGAGATTCCCCTCTTATGCATGTGAACCAGCTAAATGTGCTCCCACTCGGATAA 1410 0.4326 METEAPEDREDNRADDDTIEKGPESSEITEELSNRRHGTRKSLILEIPTTSTVDEDFVRINMPLTPPPRKVAFSPCPSPSASRNRSTMKTLFPKLTLKIRSTSSQQIENAAFLALEGSPKVAPKKPLLPRTFSLTKLITPRGKNTASLPVTPIAHSNPGSTHGGNAAYLASIDKGIQLPMHRSRSVPILNKAGSTSVGGMFRIIPTTPTSATSPSGDSVENEDGGEDIPEEEAVCRICMVELGEGADDTLKLECSCKGELSLAHQQCAVKWFSIKGNRTCDVCKQEVKNLPVTLLRLQTAPRGQHAEISQTRVWQDAPILVVVNMLAYFCFLEQLLVSSMGSGAVAMSLPFSCILGLLGSMTSTTMVRRNHVWVYATVQFVLVVVSGHLFYSLVHMQAVLAILLATFTGFGAVMFVASVLAEISNWRRISLGQLNQEEAVAPDQSEAPESNLRDSPLMHVNQLNVLPLG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03769 469 PANTHER OS02G0165000 PROTEIN 1 437 - -
Arst2g03769 469 MobiDBLite consensus disorder prediction 1 37 - -
Arst2g03769 469 SMART ringv_2 234 284 IPR011016 GO:0008270
Arst2g03769 469 Pfam RING-variant domain 235 283 IPR011016 GO:0008270
Arst2g03769 469 SUPERFAMILY RING/U-box 231 287 - -
Arst2g03769 469 MobiDBLite consensus disorder prediction 207 226 - -
Arst2g03769 469 CDD RING_CH-C4HC3_MARCH 235 284 - -
Arst2g03769 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 292 IPR013083 -
Arst2g03769 469 ProSiteProfiles Zinc finger RING-CH-type profile. 227 290 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03769 Arst-Chr2 93597432 93600036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03769 232 290 C3H Transcription Factor Family AT2G37950 42.373 1.27e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03769 - - gmx:100787963 585.874