Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03767 ATGGAGACTGAAGCTCCTGAAGACAGAGAGGATAACAGAGCTGATGACGACACAATCGAAAAGGGTCCAGAATCATCTGAAATAACTGAGGAACTCTCAAATAGACGACATGGGACTAGGAAAAGCCTCATCTTGGAGATTCCAACAACAAGCACTGTGGATGAAGATTTTGTGAGGATAAACATGCCTCTAACTCCTCCTCCAAGAAAAGTGGCCTTTTCACCATGTCCAAGCCCTTCAGCATCAAGGAATAGATCAACTATGAAAACTTTATTTCCCAAACTCACTTTAAAAATCAGGAGCACAAGCTCACAGCAGATCGAAAATGCTGCTTTTCTTGCACTCGAAGGTTCACCAAAGGTGGCACCAAAGAAGCCTCTTCTTCCGAGGACATTTTCACTTACAAAGTTGATCACCCCTAGAGGGAAGAACACGGCATCCTTGCCTGTAACACCGATTGCTCACTCTAATCCAGGGTCCACACATGGAGGAAATGCTGCTTATCTAGCTTCAATTGATAAAGGGATCCAATTACCAATGCATCGTTCTCGTTCAGTTCCAATACTTAACAAGGCAGGGAGCACAAGTGTAGGTGGAATGTTTCGTATAATTCCAACCACACCAACATCAGCGACATCTCCATCTGGTGATAGTGTTGAGAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGGGAAGGTGCTGATGATACTCTTAAATTGGAGTGTAGTTGCAAAGGTGAACTTTCACTGGCTCACCAACAATGTGCAGTTAAATGGTTTAGCATTAAAGGAAACAGAACATGTGATGTTTGCAAGCAAGAAGTTAAGAACTTACCTGTGACTCTCTTGCGGCTTCAAACTGCACCTAGAGGGCAGCATGCTGAGATTTCTCAAACAAGGCAAGGGGTTTGGCAGGATGCTCCCATTCTTGTAGTTGTCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTATGGGCTCTGGTGCTGTTGCCATGTCTCTTCCATTTTCTTGTATACTTGGTCTTCTTGGTAGCATGACATCTACAACAATGGGTAGGGCTTATTGTACCTTTAGGTTCATATGCAAGCTGTTCTAG 1149 0.4334 METEAPEDREDNRADDDTIEKGPESSEITEELSNRRHGTRKSLILEIPTTSTVDEDFVRINMPLTPPPRKVAFSPCPSPSASRNRSTMKTLFPKLTLKIRSTSSQQIENAAFLALEGSPKVAPKKPLLPRTFSLTKLITPRGKNTASLPVTPIAHSNPGSTHGGNAAYLASIDKGIQLPMHRSRSVPILNKAGSTSVGGMFRIIPTTPTSATSPSGDSVENEDGGEDIPEEEAVCRICMVELGEGADDTLKLECSCKGELSLAHQQCAVKWFSIKGNRTCDVCKQEVKNLPVTLLRLQTAPRGQHAEISQTRQGVWQDAPILVVVNMLAYFCFLEQLLVSSMGSGAVAMSLPFSCILGLLGSMTSTTMGRAYCTFRFICKLF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03767 382 MobiDBLite consensus disorder prediction 1 37 - -
Arst2g03767 382 SUPERFAMILY RING/U-box 231 287 - -
Arst2g03767 382 SMART ringv_2 234 284 IPR011016 GO:0008270
Arst2g03767 382 PANTHER OS02G0165000 PROTEIN 1 374 - -
Arst2g03767 382 MobiDBLite consensus disorder prediction 207 226 - -
Arst2g03767 382 CDD RING_CH-C4HC3_MARCH 235 284 - -
Arst2g03767 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 292 IPR013083 -
Arst2g03767 382 ProSiteProfiles Zinc finger RING-CH-type profile. 227 290 IPR011016 GO:0008270
Arst2g03767 382 Pfam RING-variant domain 235 283 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03767 Arst-Chr2 93597429 93599832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03767 232 290 C3H Transcription Factor Family AT2G37950 42.373 1.35e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03767 - - gmx:100787963 471.085