Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03763 ATGGGTAACATAGGAAGTAGTAGTGCCAGCAACCGCAGAAGACACGGTGGTGGCGGTGGCGGAAGTGGACGGAGGATCCATCCTCCACCTCCTCCTCCGCCGCCGGTGACGCCACAGCCGGAAATCACAGCCAATCGGTTCGTGTACCCTGCTGCTGCGACTCCATATCATAACTATCCCGGTTATTATCCGCCGCCGGTGCCTTTGCCGGCACCCTATGACCACCACCACCGGCCCGCGGCGGTGGAGCCGATGTGGGGGCGGTATCCTCCGCCGGCAGCGCCTATGCCTCCGACGCCGTATGTGGAGCACCAGAAGGCGGTTACTATAAAAAATGATGTGAACATCAAGAAGGAAACTTTGAGGATTGAAGCTGATGAAGAGAACCCTGGGAAGTTCCTTGTTTCATTCACATTTGACGCCACCGTTTCTGGGAGCATTACTATACTTTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTTACTCCAATGAAGGAAGATTCTCTTCCACCTGTGACTGTACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACTGGTATTGATTTTTTGCAATTTGAGGAGTCCGAGTTATTGAAAGTGGGAGAGATGGATATCTATCCTCTAGTAGTTAAGGCAGATGCAATGTTGGGCGATCATGACGGATCAAATGAGACTCCAAAGCATGGATCAAATGAAACTCGAAATGAAGGATCTAATGAAACTCCAAATGACGGACCTAATGAAACTCCAGTAACAGGTATTACAAACTCGCAGATAACAAAAGCAGTGTTTGAGAAGGAGAAAGGGGAATTCCAGGTGAAGGTTGTCAAGCAGATCTTGTGGGTGAATGGATTGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAATTCAGTGGAGAGTGAAGTGGATGGAAATGACCCAGGAAAAGAATGTGTTATTTGTCTGTCAGAGCCCAGGGATACGACTGTCCTTCCTTGCCGTCACATGTGCATGTGTAGTGGATGTGCGAAGGTTTTGAGGTTCCAGACAAATAGGTGTCCAATCTGCAGACAGCCAGTTGAGAGGCTTCTGGAGATCAAGGTTGGGGCAGAAGCCGAACCTCAGGAGTGA 1128 0.4956 MGNIGSSSASNRRRHGGGGGGSGRRIHPPPPPPPPVTPQPEITANRFVYPAAATPYHNYPGYYPPPVPLPAPYDHHHRPAAVEPMWGRYPPPAAPMPPTPYVEHQKAVTIKNDVNIKKETLRIEADEENPGKFLVSFTFDATVSGSITILFFAKEGEGCILTPMKEDSLPPVTVHFQQGLGQKFRQPAGTGIDFLQFEESELLKVGEMDIYPLVVKADAMLGDHDGSNETPKHGSNETRNEGSNETPNDGPNETPVTGITNSQITKAVFEKEKGEFQVKVVKQILWVNGLRYELQEIYGIGNSVESEVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGAEAEPQE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03763 375 SMART ring_2 317 355 IPR001841 -
Arst2g03763 375 MobiDBLite consensus disorder prediction 1 42 - -
Arst2g03763 375 FunFam probable E3 ubiquitin-protein ligase LOG2 301 366 - -
Arst2g03763 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 366 IPR013083 -
Arst2g03763 375 MobiDBLite consensus disorder prediction 240 260 - -
Arst2g03763 375 Pfam Zinc finger, C3HC4 type (RING finger) 315 361 - -
Arst2g03763 375 SUPERFAMILY RING/U-box 316 361 - -
Arst2g03763 375 CDD mRING-HC-C3HC5_MGRN1-like 315 356 IPR045195 -
Arst2g03763 375 MobiDBLite consensus disorder prediction 222 239 - -
Arst2g03763 375 MobiDBLite consensus disorder prediction 25 40 - -
Arst2g03763 375 PANTHER MAHOGUNIN 1 367 IPR045194 GO:0061630
Arst2g03763 375 ProSiteProfiles Zinc finger RING-type profile. 317 356 IPR001841 -
Arst2g03763 375 MobiDBLite consensus disorder prediction 222 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03763 Arst-Chr2 93588298 93591576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03763 87 336 C3H Transcription Factor Family AT3G09770 60.547 6.55e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03763 - - aip:107626498 661.759