Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03706 ATGGCAGAAATGGGTGAGGAGGTGAAAGCAATTATTCCCGAGTCTGTGCTTAAAAAGCAGAAGAGGGAGGAGGAATGGGCCTTGAAGAAAAAGGAGGAGCTTAATGCTGCAAAGAAGAAGAGAGCAGAGAGCCGAAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAGCTGATCCAATTGAAGCGGGAAGCAAAGCTGAAAGGTGGATTCTATGTTGATCCAGAGGCTAAGCTCCTGTTTATCATCCGCATCCGTGGTATCAATGCCATGGATCCCAAGTCAAGAAAGATCTTGCAGTTGTTGAGGTTGAGACAGATCTTCAATGGTGTGTTCTTAAAAGTCAACAAGGCCACAGTGAACATGCTTCACAGGGTTGAGCCATATGTGACCTATGGATACCCAAATCTGAAAAGTGTAAAAGAGCTTATTTACAAGAGGGGCTTTGGTAAGTTGAACAAGCAGAGAATTGCCCTAACCGACAACTCAATCATTGAGAAGGCACTGGGCCAACATGGAATCATCTGCATTGAAGATCTTATCCATGAGATCATAACAGTTGGACCCCATTTCAAGGAAGCAAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCATTGGGTGGCTTGAAGAAGAAGAGGAACCACTATGTTGAAGGAGGAGATGCCGGAAACAGGGAGAACTACATCAATGAGCTTATCAGGAGAATGAATTAG 741 0.4453 MAEMGEEVKAIIPESVLKKQKREEEWALKKKEELNAAKKKRAESRKLIYSRAKQYAKEYQEQEKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRIALTDNSIIEKALGQHGIICIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03706 246 NCBIfam 60S ribosomal protein uL30 13 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Arst2g03706 246 SUPERFAMILY Ribosomal protein L30p/L7e 87 246 IPR036919 -
Arst2g03706 246 Coils Coil 17 37 - -
Arst2g03706 246 CDD Ribosomal_L7_archeal_euk 87 246 IPR035808 -
Arst2g03706 246 PANTHER 60S RIBOSOMAL PROTEIN L7 10 246 IPR039699 -
Arst2g03706 246 FunFam 60S ribosomal protein L7 192 246 - -
Arst2g03706 246 Coils Coil 52 76 - -
Arst2g03706 246 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Arst2g03706 246 FunFam 60S ribosomal protein L7 87 191 - -
Arst2g03706 246 Pfam Ribosomal protein L30p/L7e 88 138 IPR016082 -
Arst2g03706 246 ProSitePatterns Ribosomal protein L30 signature. 106 138 IPR018038 -
Arst2g03706 246 Gene3D - 192 246 IPR036919 -
Arst2g03706 246 Gene3D - 87 191 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03706 Arst-Chr2 93196460 93198326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03706 7 246 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.833 2.15e-157 435