Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03681 ATGTTTCCAGTTACTTCAACTTCGACGTGTTTATCTTCAGAAAATAAGAGCCAGTGGAAGATCGCCAAAAAGTATCAGCGACTGCATAAATTAATTTTTGAAGAAAATGGATTGCCTGATGGAGCCAAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGTAGGCATCAAAAGGGGCTCTGGAATTGTGTGTGGATGCTGTAACACGCTGGTCAGCCCCTCACAATTTGAGGTACATGCAGGTTGGGCTTCTCGAAGGAAACCTTATGCATACATCTACACTTCAGATGGGATGTCTCTCCATGAGTTAGCAATGTTTATACTAAAAGAACGGAAATACACTGCAAAGTATAATGATGATCTATGCGTTGTCTGTTGGGATGGGGGAAACCTGCTGCTCTGTGATGGATGCCCAAGGTCGTTTCACAAAGAATGTGCATCAGTATCAAGTGTTCCTCGTGGTAATTGGTATTGTCAAATTTGCCAAAACATGTTCCAAAGAGAAAGTTTTGTTGCGGACAATGTCCATGCTGTGGCAGCAGAAAGGGTTGAAGGAGTTGGTCCCATTGAACAGATTGCCAGATGCATTCGCATAGTAAAAGATACCGATGCTGAGATGGGTGGATGTGTTTTGTGCGGAGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGCACAATAATATTCTGTGATCAGTGTGAAAAGGAATACCATGTTGGTTGTTTGAGGGATCATAAGATGGCATTTTTAAAGGAGTTGCCAGAAGGGATTTGGATTTGCTGCGATGATTGCACAAGGATACATTCTATTTTGGAGAACATCCTGGTTAGGGGGGCTGAGAGACTTCCGGAATCTCTCTTGGATGTAATAAAGGTGAAGCAAGAGGAAATACTTTTAGGACTACCTAATGAGATTGATGTAAGATGGAGACTTCTTAATGGAAAAATTGCTAGCTCTGAAACTAGGCCATTCCTTTTGCAGGCTGTGTCAATGTTTCACGAATGTTTTGATGCTATTATTGATCCAGTTAGTGGAAGTGACCTTATTCCTGCCATGGTTTATGGAAGGAGTGTACAGACTCAGGATTTTGGAGGATTTTATTGTGCATTATTAATGGTCAATTCATGTGTGGTATCTGCGGCTATGCTTCGAGTTTTTGGGAGAGATGTTGCAGAGCTCCCTTTAGTTGCAACGTGTTATAAGAACCGTGGAAAGGGTTATTTCCAAACGCTGTTCTCTTGCATTGAGAGGCTGCTGGCTTTCTTGAATGTGAAGAACTTTGTTCTACCAGCTGCTGAGGAAGCAATATCTATATGGACCGATAAATTCGGGTTTAGCCTGATGAAACCTGAGCAGCTTAGCAATTATAGAAAGACCTTCGGTCAGATGATGGCATTCAAAGGGACAATTATGCTCGAAAAACCGGTTCCATCGTGTCGGATCGTCAATACCCGATCCTGA 1464 0.4242 MFPVTSTSTCLSSENKSQWKIAKKYQRLHKLIFEENGLPDGAKVAYYARGQKLLVGIKRGSGIVCGCCNTLVSPSQFEVHAGWASRRKPYAYIYTSDGMSLHELAMFILKERKYTAKYNDDLCVVCWDGGNLLLCDGCPRSFHKECASVSSVPRGNWYCQICQNMFQRESFVADNVHAVAAERVEGVGPIEQIARCIRIVKDTDAEMGGCVLCGGSDFSRSGFGPRTIIFCDQCEKEYHVGCLRDHKMAFLKELPEGIWICCDDCTRIHSILENILVRGAERLPESLLDVIKVKQEEILLGLPNEIDVRWRLLNGKIASSETRPFLLQAVSMFHECFDAIIDPVSGSDLIPAMVYGRSVQTQDFGGFYCALLMVNSCVVSAAMLRVFGRDVAELPLVATCYKNRGKGYFQTLFSCIERLLAFLNVKNFVLPAAEEAISIWTDKFGFSLMKPEQLSNYRKTFGQMMAFKGTIMLEKPVPSCRIVNTRS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03681 487 Pfam PHD-finger 123 164 IPR019787 -
Arst2g03681 487 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 268 IPR013083 -
Arst2g03681 487 SUPERFAMILY FYVE/PHD zinc finger 104 164 IPR011011 -
Arst2g03681 487 SUPERFAMILY FYVE/PHD zinc finger 200 263 IPR011011 -
Arst2g03681 487 SMART PHD_3 209 266 IPR001965 -
Arst2g03681 487 SMART PHD_3 122 163 IPR001965 -
Arst2g03681 487 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 363 450 IPR016181 -
Arst2g03681 487 Pfam Tify domain binding domain 59 106 IPR032308 -
Arst2g03681 487 ProSitePatterns Zinc finger PHD-type signature. 123 162 IPR019786 -
Arst2g03681 487 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 189 IPR013083 -
Arst2g03681 487 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 109 186 - -
Arst2g03681 487 ProSiteProfiles Zinc finger PHD-type profile. 120 165 IPR019787 -
Arst2g03681 487 PANTHER AUTOIMMUNE REGULATOR 8 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03681 Arst-Chr2 93080812 93085250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03681 19 484 PHD Transcription Factor Family AT2G36720 59.315 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst2g03681 TDBD 2.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03681 - - ahf:112728915 1005.74