Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03680 ATGTTCACACCACATTCAAGGTCTCCTAAACCAGTATTGTTTCCCAGTCCATCAAGCACTTCTGAACTCTGTAATTCCTCACAAACTAAGAGACGCTGGAAGAAAAGAGAAAAGTCATCAAAACGGGATGCCAGCTCAGCTTTTTCCAAGGGTGCTTCAGATCCTATTCTATTCCACAAGAGTTTGTGGAAGAGGAAAACAAAGTCATATAAACTGACAGTAAAATTAAACACTGCTCCAGCTACTTCAACTTCGATGTTTCCAGTTACTTCAACTTCGACGTGTTTATCTTCAGAAAATAAGAGCCAGTGGAAGATCGCCAAAAAGTATCAGCGACTGCATAAATTAATTTTTGAAGAAAATGGATTGCCTGATGGAGCCAAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGTAGGCATCAAAAGGGGCTCTGGAATTGTGTGTGGATGCTGTAACACGCTGGTCAGCCCCTCACAATTTGAGGTACATGCAGGTTGGGCTTCTCGAAGGAAACCTTATGCATACATCTACACTTCAGATGGGATGTCTCTCCATGAGTTAGCAATGTTTATACTAAAAGAACGGAAATACACTGCAAAGTATAATGATGATCTATGCGTTGTCTGTTGGGATGGGGGAAACCTGCTGCTCTGTGATGGATGCCCAAGGTCGTTTCACAAAGAATGTGCATCAGTATCAAGTGTTCCTCGTGGTAATTGGTATTGTCAAATTTGCCAAAACATGTTCCAAAGAGAAAGTTTTGTTGCGGACAATGTCCATGCTGTGGCAGCAGAAAGGGTTGAAGGAGTTGGTCCCATTGAACAGATTGCCAGATGCATTCGCATAGTAAAAGATACCGATGCTGAGATGGGTGGATGTGTTTTGTGCGGAGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGCACAATAATATTCTGTGATCAGTGTGAAAAGGAATACCATGTTGGTTGTTTGAGGGATCATAAGATGGCATTTTTAAAGGAGTTGCCAGAAGGGATTTGGATTTGCTGCGATGATTGCACAAGGATACATTCTATTTTGGAGAACATCCTGGTTAGGGGGGCTGAGAGACTTCCGGAATCTCTCTTGGATGTAATAAAGGTGAAGCAAGAGGAAATACTTTTAGGACTACCTAATGAGATTGATGTAAGATGGAGACTTCTTAATGGAAAAATTGCTAGCTCTGAAACTAGGCCATTCCTTTTGCAGGCTGTGTCAATGTTTCACGAATGTTTTGATGCTATTATTGATCCAGTTAGTGGAAGTGACCTTATTCCTGCCATGGTTTATGGAAGGAGTGTACAGACTCAGGATTTTGGAGGATTTTATTGTGCATTATTAATGGTCAATTCATGTGTGGTATCTGCGGCTATGCTTCGAGTTTTTGGGAGAGATGTTGCAGAGCTCCCTTTAGTTGCAACGTGTTATAAGAACCGTGGAAAGGGTTATTTCCAAACGCTGTTCTCTTGCATTGAGAGGCTGCTGGCTTTCTTGAATGTGAAGAACTTTGTTCTACCAGCTGCTGAGGAAGCAATATCTATATGGACCGATAAATTCGGGTTTAGCCTGATGAAACCTGAGCAGCTTAGCAATTATAGAAAGACCTTCGGTCAGATGATGGCATTCAAAGGGACAATTATGCTCGAAAAACCGGTTCCATCGTGTCGGATCGTCAATACCCGATCCTGA 1719 0.4218 MFTPHSRSPKPVLFPSPSSTSELCNSSQTKRRWKKREKSSKRDASSAFSKGASDPILFHKSLWKRKTKSYKLTVKLNTAPATSTSMFPVTSTSTCLSSENKSQWKIAKKYQRLHKLIFEENGLPDGAKVAYYARGQKLLVGIKRGSGIVCGCCNTLVSPSQFEVHAGWASRRKPYAYIYTSDGMSLHELAMFILKERKYTAKYNDDLCVVCWDGGNLLLCDGCPRSFHKECASVSSVPRGNWYCQICQNMFQRESFVADNVHAVAAERVEGVGPIEQIARCIRIVKDTDAEMGGCVLCGGSDFSRSGFGPRTIIFCDQCEKEYHVGCLRDHKMAFLKELPEGIWICCDDCTRIHSILENILVRGAERLPESLLDVIKVKQEEILLGLPNEIDVRWRLLNGKIASSETRPFLLQAVSMFHECFDAIIDPVSGSDLIPAMVYGRSVQTQDFGGFYCALLMVNSCVVSAAMLRVFGRDVAELPLVATCYKNRGKGYFQTLFSCIERLLAFLNVKNFVLPAAEEAISIWTDKFGFSLMKPEQLSNYRKTFGQMMAFKGTIMLEKPVPSCRIVNTRS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03680 572 SMART PHD_3 294 351 IPR001965 -
Arst2g03680 572 SMART PHD_3 207 248 IPR001965 -
Arst2g03680 572 Pfam Tify domain binding domain 144 191 IPR032308 -
Arst2g03680 572 ProSiteProfiles Zinc finger PHD-type profile. 205 250 IPR019787 -
Arst2g03680 572 SUPERFAMILY FYVE/PHD zinc finger 189 249 IPR011011 -
Arst2g03680 572 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 194 271 - -
Arst2g03680 572 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 450 535 IPR016181 -
Arst2g03680 572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 274 IPR013083 -
Arst2g03680 572 SUPERFAMILY FYVE/PHD zinc finger 285 348 IPR011011 -
Arst2g03680 572 MobiDBLite consensus disorder prediction 12 27 - -
Arst2g03680 572 ProSitePatterns Zinc finger PHD-type signature. 208 247 IPR019786 -
Arst2g03680 572 MobiDBLite consensus disorder prediction 1 50 - -
Arst2g03680 572 PANTHER AUTOIMMUNE REGULATOR 42 562 - -
Arst2g03680 572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 353 IPR013083 -
Arst2g03680 572 Pfam PHD-finger 208 249 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03680 Arst-Chr2 93080679 93085250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03680 104 569 PHD Transcription Factor Family AT2G36720 59.315 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst2g03680 TDBD 2.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03680 - - adu:107476252 1170.61