Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03668 CCAGCTCAACACAAGAGCTGGGCCGACGAAGCCGACGATGATGCCGAAGCCGCCAATGAAACAACCGCCCCCACCACAGCGGTTCCATCTAGCTCATCGCCGTCGCTCAACGTCGACGAATTATCGATCGACGAAAACAAGAAACCTCCGAAGCTATTAGACGATCCGGAAGACTCCAACATCCAAGCGGTTACTTCTGGCGACACGCCGTACACCTCGGCGGCGACGTTCGAGGATCTGAATTTGTCGGCGGAGCTTTTGAGAGGACTCTACGTTGAGATGAGGTTCCAGAAACCGAGCAAGATCCAAGCTATAAGCTTGCCGATGATCTTGAATCCGCCGCATCGTGATTTGATCGCTCAGGCTCACAACGGTTCCGGCAAGACCACGTGCTTTGTTTTAGGGATGCTTAGTCGTGTGGATCCTTCGGTGCAAGCTCCTCAAGCTCTCTGCATTTGTCCAACGAGGGAGCTTGCTATTCAGAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAGGGATTAGCTCGGAGTGTGCCGTTCCGACAGATAGCAGGGATTCACTTCCAATTCAAAAACGGGAGCCAATTAAGGCTCAGGTGGTTATTGGGACTCCTGGCACCATAAAGAAGTGGATTTCTTTCAAGAAATTGGGTGTGACCAGATTGAAGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAGGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATTCAATTCTAGCTGCCAGGTTCTTCTATTTTCTGCCACATTCAATGACATTGTCAAGAACTTTGTTGAGAGGACAGTTAAAAAGGACCATAATAAACTTTTTGTTAAGAAAGAAGAGCTTTCTTTAGACGCAGTGAAGCAGTATAAAGTTCGCTGCCCTGATGAGTTGTCGAAGATTGAGGTGATAAAAGATTACATATTCGAATTAGGAGAAAATGTGGGCCAAACCATCATATTCGTGCGCACGAGACAGAGTGCAAAAATGCTGCACAAGTCACTTGTCGACATGGGGTACGAGGTTACATCGATACAAGGTGCTCTTGACCATGAAGAGAGAGACAAAATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTTATATCCACGGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTCAATTTGGTTATCAACTATGATCTCCCAATAAAACATACTGCGGAGTATACACGGGAATTTGAGCCTGATTATGAGGTGTACTTGCACAGAGTTGGTAGGGCTGGTCGATTTGGCCGTAAGGGGGCTGTGTTTAACCTAATATATGATGAAAAAGATGAAAGGCTGATGTCAAAGATCGAGAACCATTTTGGCACCCGTGTATCAGAGGTACGAGAAAAAAGTGTTGAAGACTATAAAGCTGCTCTTAAGGAAGCCGGCTTATTACAATGA 1455 0.4577 MSEPAATDDKTSSPPPPPAQHKSWADEADDDAEAANETTAPTTAVPSSSSPSLNVDELSIDENKKPPKLLDDPEDSNIQAVTSGDTPYTSAATFEDLNLSAELLRGLYVEMRFQKPSKIQAISLPMILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSVQAPQALCICPTRELAIQNTEVLRKMGKHTGISSECAVPTDSRDSLPIQKREPIKAQVVIGTPGTIKKWISFKKLGVTRLKILVFDEADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKKEELSLDAVKQYKVRCPDELSKIEVIKDYIFELGENVGQTIIFVRTRQSAKMLHKSLVDMGYEVTSIQGALDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPIKHTAEYTREFEPDYEVYLHRVGRAGRFGRKGAVFNLIYDEKDERLMSKIENHFGTRVSEVREKSVEDYKAALKEAGLLQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03668 501 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 92 121 IPR014014 GO:0003724
Arst2g03668 501 Pfam DEAD/DEAH box helicase 118 290 IPR011545 GO:0003676|GO:0005524
Arst2g03668 501 SMART ultradead3 112 318 IPR014001 -
Arst2g03668 501 MobiDBLite consensus disorder prediction 58 72 - -
Arst2g03668 501 SMART helicmild6 357 450 IPR001650 -
Arst2g03668 501 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 331 491 IPR001650 -
Arst2g03668 501 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 126 302 IPR014001 -
Arst2g03668 501 Gene3D - 309 498 IPR027417 -
Arst2g03668 501 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 50 470 - -
Arst2g03668 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 468 IPR027417 -
Arst2g03668 501 MobiDBLite consensus disorder prediction 36 57 - -
Arst2g03668 501 MobiDBLite consensus disorder prediction 1 89 - -
Arst2g03668 501 CDD SF2_C_DEAD 315 459 - -
Arst2g03668 501 CDD DEADc_DDX19_DDX25 99 298 - -
Arst2g03668 501 Gene3D - 71 308 IPR027417 -
Arst2g03668 501 Pfam Helicase conserved C-terminal domain 328 450 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03668 Arst-Chr2 92988562 92991570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03668 93 482 Eukaryotic Initiation Factors Gene Family AT1G72730 37.468 4.64e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03668 K18655 - qsa:O6P43_010208 729.939