Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03641 ATGGATTGGAATAATAATGGCAGCACTAGATCCTTTGTTCCTCGACCTGATTCTTCTTTCAGCTTCCTCTACAACTATACCTACACCAACCCTTACCCAGCAATGGTGGAGGGTCCATCATCATCAACAACATTATCAATGGAGAAAATGAACAACAACAACAACAACTTAATGATGGAGAAGAAAAAGAGGCTAACAAATGAACAGCTGGAGTCACTAGAAAGAAGCTTCCAGAAGGAAATAAAGTTGGATCGCCAAATTGCTGTGTGGTTCCAAAATAGACGTGCAAGGTGGAAGGCTAAGCAACTTGAGCATTTGTATGATTCTCTCAAACAAGAGTTTGATCTCATTTCCAAGGAGAAACAAAAGCTTCAACAAGAGGTAATGAAATTGAAGGGAATACTGAGAGATCATCAAGGTTGTAGAACTACTCAGATATCAAATTACACTGAAATCTCTGGTGGAGGTGGTGGTGGTGGTGACGAGACTACCGTAGAAAGCACTTCTGAGGCCCTACGCTGTTCCAACACCAACAAATCATCATCAATTTCAAGAGCTACTGCTTCCATTGTTCATAATCATAATAATAATAATAATAATGGAAATTGCTCTTTCACTGTTGAAGACTACAACACTACAGTTCCACCAACAGTTCTTCCCTATTGGCCTGCTGTTCCTTATTACCCTTAA 690 0.3986 MDWNNNGSTRSFVPRPDSSFSFLYNYTYTNPYPAMVEGPSSSTTLSMEKMNNNNNNLMMEKKKRLTNEQLESLERSFQKEIKLDRQIAVWFQNRRARWKAKQLEHLYDSLKQEFDLISKEKQKLQQEVMKLKGILRDHQGCRTTQISNYTEISGGGGGGGDETTVESTSEALRCSNTNKSSSISRATASIVHNHNNNNNNGNCSFTVEDYNTTVPPTVLPYWPAVPYYP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03641 229 SMART HOX_1 59 105 IPR001356 GO:0003677
Arst2g03641 229 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 51 192 IPR045224 GO:0003700
Arst2g03641 229 ProSiteProfiles 'Homeobox' domain profile. 84 101 IPR001356 GO:0003677
Arst2g03641 229 Pfam Homeobox associated leucine zipper 101 135 IPR003106 GO:0006355|GO:0043565
Arst2g03641 229 CDD homeodomain 61 102 IPR001356 GO:0003677
Arst2g03641 229 SUPERFAMILY Homeodomain-like 44 103 IPR009057 -
Arst2g03641 229 Coils Coil 93 127 - -
Arst2g03641 229 Gene3D - 83 114 - -
Arst2g03641 229 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03641 Arst-Chr2 92882218 92884114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03641 1 131 Homeobox Transcription Factor Family AT5G03790 44.242 5.42e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst2g03641 HALZ 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03641 - - aip:107628062 355.91