Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03640 ATGGATTGGAATAATAATGGCAGCACTAGATCCTTTGTTCCTCGACCTGATTCTTCTTTCAGCTTCCTCTACAACTATACCTACACCAACCCTTACCCAGGAGGATCATCAGCAATGGTGGAGGGTCCATCATCATCAACAACATTATCAATGGAGAAAATGAACAACAACAACAACAACTTAATGATGGAGAAGAAAAAGAGGCTAACAAATGAACAGCTGGAGTCACTAGAAAGAAGCTTCCAGAAGGAAATAAAGTTGGATCGCCAAATTGCTGTGTGGTTCCAAAATAGACGTGCAAGGTGGAAGGCTAAGCAACTTGAGCATTTGTATGATTCTCTCAAACAAGAGTTTGATCTCATTTCCAAGGAGAAACAAAAGCTTCAACAAGAGGTAATGAAATTGAAGGGAATACTGAGAGATCATCAAGGTTGTAGAACTACTCAGATATCAAATTACACTGAAATCTCTGGTGGAGGTGGTGGTGGTGGTGACGAGACTACCGTAGAAAGCACTTCTGAGGCCCTACGCTGTTCCAACACCAACAAATCATCATCAATTTCAAGAGCTACTGCTTCCATTGTTCATAATCATAATAATAATAATAATAATGGAAATTGCTCTTTCACTGTTGAAGACTACAACACTACAGTTCCACCAACAGTTCTTCCCTATTGGCCTGCTGTTCCTTATTACCCTTAA 702 0.4003 MDWNNNGSTRSFVPRPDSSFSFLYNYTYTNPYPGGSSAMVEGPSSSTTLSMEKMNNNNNNLMMEKKKRLTNEQLESLERSFQKEIKLDRQIAVWFQNRRARWKAKQLEHLYDSLKQEFDLISKEKQKLQQEVMKLKGILRDHQGCRTTQISNYTEISGGGGGGGDETTVESTSEALRCSNTNKSSSISRATASIVHNHNNNNNNGNCSFTVEDYNTTVPPTVLPYWPAVPYYP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03640 233 ProSiteProfiles 'Homeobox' domain profile. 88 105 IPR001356 GO:0003677
Arst2g03640 233 Pfam Homeobox associated leucine zipper 105 139 IPR003106 GO:0006355|GO:0043565
Arst2g03640 233 SUPERFAMILY Homeodomain-like 48 107 IPR009057 -
Arst2g03640 233 Gene3D - 85 118 - -
Arst2g03640 233 CDD homeodomain 65 106 IPR001356 GO:0003677
Arst2g03640 233 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 55 196 IPR045224 GO:0003700
Arst2g03640 233 Coils Coil 97 131 - -
Arst2g03640 233 SMART HOX_1 63 109 IPR001356 GO:0003677
Arst2g03640 233 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03640 Arst-Chr2 92882218 92884114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03640 1 135 Homeobox Transcription Factor Family AT5G03790 45.455 7.56e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst2g03640 HALZ 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03640 - - aip:107628062 365.155