Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03639 ATGGATTGGAATAATAATGGCAGCACTAGATCCTTTGTTCCTCGACCTGATTCTTCTTTCAGCTTCCTCTACAACTATACCTACACCAACCCTTACCCAGGGATAGAAATGAAACAAGGAGGATCATCAGCAATGGTGGAGGGTCCATCATCATCAACAACATTATCAATGGAGAAAATGAACAACAACAACAACAACTTAATGATGGAGAAGAAAAAGAGGCTAACAAATGAACAGCTGGAGTCACTAGAAAGAAGCTTCCAGAAGGAAATAAAGTTGGATCGCCAAATTGCTGTGTGGTTCCAAAATAGACGTGCAAGGTGGAAGGCTAAGCAACTTGAGCATTTGTATGATTCTCTCAAACAAGAGTTTGATCTCATTTCCAAGGAGAAACAAAAGCTTCAACAAGAGGTAATGAAATTGAAGGGAATACTGAGAGATCATCAAGGTTGTAGAACTACTCAGATATCAAATTACACTGAAATCTCTGGTGGAGGTGGTGGTGGTGGTGACGAGACTACCGTAGAAAGCACTTCTGAGGCCCTACGCTGTTCCAACACCAACAAATCATCATCAATTTCAAGAGCTACTGCTTCCATTGTTCATAATCATAATAATAATAATAATAATGGAAATTGCTCTTTCACTGTTGAAGACTACAACACTACAGTTCCACCAACAGTTCTTCCCTATTGGCCTGCTGTTCCTTATTACCCTTAA 720 0.3986 MDWNNNGSTRSFVPRPDSSFSFLYNYTYTNPYPGIEMKQGGSSAMVEGPSSSTTLSMEKMNNNNNNLMMEKKKRLTNEQLESLERSFQKEIKLDRQIAVWFQNRRARWKAKQLEHLYDSLKQEFDLISKEKQKLQQEVMKLKGILRDHQGCRTTQISNYTEISGGGGGGGDETTVESTSEALRCSNTNKSSSISRATASIVHNHNNNNNNGNCSFTVEDYNTTVPPTVLPYWPAVPYYP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03639 239 SUPERFAMILY Homeodomain-like 55 113 IPR009057 -
Arst2g03639 239 Gene3D - 93 123 - -
Arst2g03639 239 Coils Coil 66 86 - -
Arst2g03639 239 CDD homeodomain 71 112 IPR001356 GO:0003677
Arst2g03639 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 61 202 IPR045224 GO:0003700
Arst2g03639 239 Coils Coil 103 137 - -
Arst2g03639 239 SMART HOX_1 69 115 IPR001356 GO:0003677
Arst2g03639 239 Pfam Homeobox associated leucine zipper 111 145 IPR003106 GO:0006355|GO:0043565
Arst2g03639 239 ProSiteProfiles 'Homeobox' domain profile. 94 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03639 Arst-Chr2 92882218 92884114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03639 1 141 Homeobox Transcription Factor Family AT5G03790 45.455 4.63e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst2g03639 HALZ 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03639 - - aip:107628062 383.259