Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03618 ATGAAAAAACCAAACGAGGAACCAAAGGGTAAAGCTCCAGCACCTGATTCTCCTTCTGATATTGAGCAGCTGGGGATGTCCACAACAGGGTTCTCTCCTTTGGAGTTTAGTTCTCAACCATTCTCATCAGCTTTTGATGACTCTTTTGACATTATTGATGATACCTCTTTCATGGAGTTTGAATCATTCTCAACAGCTATGAACCATCCACCACCACAACCACCATCTACAACTACAACAATAACCACCACCACTGGGGCTGTTGGGCCATTGCCTCAGCCATTGGAGTGCTTGCACGGGAATCCTGTTCCACCCTTTCTGTCTAAAACCTTCGACCTTGTGGATGACCCTTCTTTGGATACTATCATCTCATGGGGCTCCACTGGTGCTAGCTTCGTTGTGTGGGACCCTATGGAGTTTTCAAGGCTCGTGTTGCCCCGGAATTTCAAGCACAACAATTTCTCCAGTTTTGTTCGCCAGCTGAATACTTACGGATTCCGCAAGATTGACACTGACAAGTGGGAGTTTTTCAATGAAGCTTTCCAGCGAGGGAAGAAACATTTACTGAAGAACATCCAACGGCGCAGGTCAACTCAATCGCAGCAAGTTGGTAGCCACATTGGAACTTCTATTGATGCTGGGAGACCTGGACTCGAGGTTGAAATAGAGCTACTGAGGAAGGAGAGAAGTATGTTAATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGAACGGTTCACCATGCTGGAGAAGTGAATCAGAGACTAGAATCTGCAGAGCAAAGGCAGAAACAAATGGTTTCCTTCTTGGCCAAGTTATTTCAGAATCCGGCCTTCTTGGCTCGCCTTAGGGATAAGAAGGAACAAAGACAGATAGAATCTCCAAAAGCAAGAAGGAAGTTTATCAAGCATCAACACGAAGCAGGAAATTCCGAAACTCCCAAAGGTCAGGTAGTGAGGTACCAACCTGATTGGAAAAATAGAACAGTTTCTTCTGAAACTCCGGAACTAAATCCAGTTTCCTTTGAACAGTCTCCTCAATATCTCTCACAGGACTTGGCAAGAGAAATTTCTGTTGGTGCAGAAAATCTGACTTTGCAGTTGGACAAAATCATGTCAGATGAATTGGGTGCATTGCATGAGGCCATGCCAACTCCAGGAATTGTTGGAGAAGGATCATCAAGCTAG 1191 0.4509 MKKPNEEPKGKAPAPDSPSDIEQLGMSTTGFSPLEFSSQPFSSAFDDSFDIIDDTSFMEFESFSTAMNHPPPQPPSTTTTITTTTGAVGPLPQPLECLHGNPVPPFLSKTFDLVDDPSLDTIISWGSTGASFVVWDPMEFSRLVLPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFFNEAFQRGKKHLLKNIQRRRSTQSQQVGSHIGTSIDAGRPGLEVEIELLRKERSMLMQEVVDLQQQQRRTVHHAGEVNQRLESAEQRQKQMVSFLAKLFQNPAFLARLRDKKEQRQIESPKARRKFIKHQHEAGNSETPKGQVVRYQPDWKNRTVSSETPELNPVSFEQSPQYLSQDLAREISVGAENLTLQLDKIMSDELGALHEAMPTPGIVGEGSSS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03618 396 MobiDBLite consensus disorder prediction 21 35 - -
Arst2g03618 396 Coils Coil 222 242 - -
Arst2g03618 396 ProSitePatterns HSF-type DNA-binding domain signature. 145 169 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 MobiDBLite consensus disorder prediction 288 311 - -
Arst2g03618 396 MobiDBLite consensus disorder prediction 288 316 - -
Arst2g03618 396 Gene3D - 98 196 IPR036388 -
Arst2g03618 396 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 92 327 IPR027725 -
Arst2g03618 396 PRINTS Heat shock factor (HSF) domain signature 106 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 PRINTS Heat shock factor (HSF) domain signature 144 156 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 PRINTS Heat shock factor (HSF) domain signature 157 169 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 FunFam Heat stress transcription factor B-4 99 196 - -
Arst2g03618 396 Pfam HSF-type DNA-binding 106 195 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 SMART hsfneu3 102 195 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst2g03618 396 MobiDBLite consensus disorder prediction 1 35 - -
Arst2g03618 396 SUPERFAMILY "Winged helix" DNA-binding domain 101 195 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03618 Arst-Chr2 92721236 92723931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03618 81 337 HSF AT5G03720 63.258 3.68e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst2g03618 HSF_DNA-bind 6.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03618 K09419 - qsa:O6P43_005885 453.751