Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03567 ATGTCCTCCAATTCCATCTTCCTCCTAAAACCTTCATTCCAATTCTCAACCCAACACCATCATCGTCACCACCACCACCACCTCCTCCTTCTAAAACCCAAAACACCATTTTCAAAACCCATATTTTCTCCATATTACCCAAAATACCCTCCACCACTTTCCTCTACTAGAATCCACAGCTCCACCACCCCCATAACCAAAAACTCTTCAAACACCAAAAAGAACGAAACTTTACGATTCCTGCAACCTTTTCTCATCTCAAACCGCAAACCCATTATCTTGGGTTGGCTCTGCAGCGCCATCTCAGTTTTCTCCCTCTCCCAGCTCGTCTCTAGACTCGGAAAATTCAGCAACGCCGCCATTGATGGACCTCAATTGAGAAGTCAAGGTCTCATCTTGTTGTGTCTTGTGGCTGCCCGTTTGGTCTCCGGGTACGGGCAGCATGCCCTTCTTTGGGACGCTGCCCTTAAGACAGTGTACGAGGTTCGTGTCCATGTCTTTGACCGTGTCCTTGAGAGAGAGCTTGGTTACTTCGAAGGAAGAGAAGGCGGTGCTTCAGCTGGGGACATTGCTTATAGGATCACTGCTGAAGCTTCTGATGTTGCTGACACTGTTTATTCTGTTCTTAATACCATAGTACCTAGCACTCTCCAGTTATCGGCGATGATGGCTCAGATGATAGTTATAAGTCCAGTCCTTTCTTTGATTTCATTCACGGTCATTCCTTGCATGTCGCTTTTTGTTGCTTATCTTGGTCAAGAACTTCGAAAGATATCTAGAGAGGCACATCTTAGCATTGCTGCTCTCTCAGCATATCTAAACGAGATGCTTCCTGCGGTTTTCTTTGTGAAAGCAAACAACGCGGAGTTGTGTGAGAGTGCCAGGTTTAAGAGGCTGGCTCAGATAGACTATCATGCAAAATTGAACAAGAGGAGGATGAAAGCAGCTATTCCTCAGGTCATACAAGCTATTTACTATGGAACTCTCTCCATACTATGCGCTGGTTCGCTGTTGATTTCAAGAGGTTCATTTGATGGCCACAGCTTCATTTCCTTTGTGACATCATTGCTTTTCTCTATTGAACCAATCCAGGATGTGGGAAAAGCTTACAATGAATGGAGGCAGGGAGAACCGGCCGTTGAACGCTTGCATGATATGACCAAGTTTAAAGATAAGGTGGTTGAGAAACCAGATGCTGTTGAGTTAGGCCATATTATGGGAGAGCTGAAATTTCGTGATGTCTCCTTTAAATATAATGATGACATGCCACATGTTTTGAATGGGTTGAATCTTAACATTAGAGCCGGAGAGATAGTCGCTCTTGTCGGTCCTTCCGGTGGCGGGAAAACAACACTTGTAAAACTATTGCTTCGGCTTTATAACCCTGTGTCCGGCTCTATTCTAATTGATAACCATAACATTGAAAACATTCGGTTGCGAAGTTTGAGAAAACATGTTGGTCTTGTTTCTCAAGATATAACACTTTTTTCAGGTACAATTGCTGAAAACATTGGTTATAGGGACCTAACAACAAAAATTGACATGGAGAGGGTAAAGCATGTAGCTCAAACTGCTCATGCAGATGAGTTTATAAGAAAACTTCCTGAAGGATACGAAACCAATATTGGACCGAGGGGCTCTACCTTAAGTGGCGGGCAGCGGCAAAGGCTGGCTATTGCAAGGGCGCTCTATCAAGATCCGTCTATTTTGATTCTGGATGAAGCAACTTCAGCTTTAGATAGTAAATCCGAATTATTGGTTAGAAAAGCCGTCGAGCACTTGATGGAAAATCGCACGGTGCTTGTGATAGCTCATCGGTTGGAAACAGTTATGATGGCTAAAAGAGTATTCCTCATGGATAATGGGAAGCTACAAGAAGTTCCAAGATCAACTATGTTCAATGGTCACAAGGATTCATTGTTATCATCTGGCCTTGTTATTTGA 1944 0.4362 MSSNSIFLLKPSFQFSTQHHHRHHHHHLLLLKPKTPFSKPIFSPYYPKYPPPLSSTRIHSSTTPITKNSSNTKKNETLRFLQPFLISNRKPIILGWLCSAISVFSLSQLVSRLGKFSNAAIDGPQLRSQGLILLCLVAARLVSGYGQHALLWDAALKTVYEVRVHVFDRVLERELGYFEGREGGASAGDIAYRITAEASDVADTVYSVLNTIVPSTLQLSAMMAQMIVISPVLSLISFTVIPCMSLFVAYLGQELRKISREAHLSIAALSAYLNEMLPAVFFVKANNAELCESARFKRLAQIDYHAKLNKRRMKAAIPQVIQAIYYGTLSILCAGSLLISRGSFDGHSFISFVTSLLFSIEPIQDVGKAYNEWRQGEPAVERLHDMTKFKDKVVEKPDAVELGHIMGELKFRDVSFKYNDDMPHVLNGLNLNIRAGEIVALVGPSGGGKTTLVKLLLRLYNPVSGSILIDNHNIENIRLRSLRKHVGLVSQDITLFSGTIAENIGYRDLTTKIDMERVKHVAQTAHADEFIRKLPEGYETNIGPRGSTLSGGQRQRLAIARALYQDPSILILDEATSALDSKSELLVRKAVEHLMENRTVLVIAHRLETVMMAKRVFLMDNGKLQEVPRSTMFNGHKDSLLSSGLVI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03567 647 FunFam ABC transporter related 79 389 - -
Arst2g03567 647 Pfam ABC transporter 426 577 IPR003439 GO:0005524
Arst2g03567 647 Gene3D ABC transporter type 1, transmembrane domain 67 388 IPR036640 GO:0005524|GO:0016020
Arst2g03567 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 627 IPR027417 -
Arst2g03567 647 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 375 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst2g03567 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 409 646 IPR003439 GO:0005524
Arst2g03567 647 CDD ABC_6TM_exporters 92 383 - -
Arst2g03567 647 SUPERFAMILY ABC transporter transmembrane region 76 388 IPR036640 GO:0005524|GO:0016020
Arst2g03567 647 Gene3D - 400 643 IPR027417 -
Arst2g03567 647 FunFam ABC transporter ATP-binding protein 402 643 - -
Arst2g03567 647 Pfam ABC transporter transmembrane region 108 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst2g03567 647 ProSitePatterns ABC transporters family signature. 549 563 IPR017871 GO:0005524|GO:0016887
Arst2g03567 647 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 100 626 IPR039421 -
Arst2g03567 647 SMART AAA_5 435 623 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03567 Arst-Chr2 92350553 92355259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03567 131 644 Calmodulin-binding Proteins AT2G36910 29.002 8.67e-58 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03567 K02021 - gmx:100788075 829.32