Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03525 ATGTCCGGCGGCGCTGGACCTCCGCCGCAGCATACCAAGCCGGATGATTCCGGCGTCCCTATCCGGCCTCCGTTAAAGCGCCACCTCGCATTTGCGTCGATGAAGCCGTCGTTCGCTCAGCCGGATGAGTACCATAGCTTCTCCTCCTCCTCCGGTGCTCCTGACTCCGGCAGGAAACTCGCCGCCGATCAACAGGCTGAAGTCGTTGTTGTTAGATCTCCGCACATTAAGAGGAAGGGTGGAATGACTAATATTGAAGGAGACTCGCAAAAGCTTAGTAATGTTCCTGGATCAGCAAACGCAGCAAGTAGTCCTTTCAAAACTCCAGTGTCGTCCAAAGGGGGAAGGACGCATGCTAAGTCAAAGGTTTCCAAAGAAGGAATGCAATGCCCTCAGACTCCCATCTCCAATTCTGGTTCCCCATCTCCTCTTACTCCTGCTGGAAGCTGTCGCTATGACAACTCCTTAGGTATGTTGACAAAAAAGTTTGTCAATTTGGTAAAGCATTCAGAAGATGGCAATCTTGACCTAAATCAAGCAGCAGAAACTTTGGAGGTGAAAAAGAGGAGGATATATGACATAACTAATGTTTTGGAAGGCATTGGTCTCATTGAAAAGAAGCTCAAGAACAGAATACATTGGAAGGGAACAGAATCTTCTTCCGGTGACGTGGATGGTGATATCTCGATGCTTAAGGAAGAAGTTGAGAGACTCTCCTTGGAAGAGCATAGATTAGATGACCGAATAAGGGAAATGCAAGAAAGGCTTAGGAGTTTGAGCGAAGATGAAAATAAGCAGAAGTTCCTTTTTGTGACTGAAGAAGATATTAAGGCCGTACCTTGCTTCCAGAATGAAACCCTGATAGCAATTAAAGCTCCACATGGAACCACCCTAGAAGTCCCTGATCCTGAGGAAGCTGTTGACTATCTGCAGAGGAGATATAGGATCATTCTTAGAAGTACTATGGGGCCCATTGATGTTTACCTTATCAGTCAATTCGAAGAGAGATTTGAAGAGATAAATGGTCCTGAGCCCCCTGTGAGCCTCCCGCTTCCTTCGAGTTCAGGGTCCAATGAACCACCAGTGGCAGAAACAGTTCCTGCGGAGTGCAGTGCAAAAGGACTAGAACCTCAACCTCAGATCCCCTCTCACACGTACTCTGATCTGAACACATCACAAGACTTTGGTGGGGGCATGATGAAGATTGTCCCTTCAGATGCTGATAATGATGCAGATTATTGGCTTCTATCAGATGCTGACATTAGCATAACAGATATGTGGAGAACAGATTTGTTGATTGGAATGGAGTAG 1311 0.4668 MSGGAGPPPQHTKPDDSGVPIRPPLKRHLAFASMKPSFAQPDEYHSFSSSSGAPDSGRKLAADQQAEVVVVRSPHIKRKGGMTNIEGDSQKLSNVPGSANAASSPFKTPVSSKGGRTHAKSKVSKEGMQCPQTPISNSGSPSPLTPAGSCRYDNSLGMLTKKFVNLVKHSEDGNLDLNQAAETLEVKKRRIYDITNVLEGIGLIEKKLKNRIHWKGTESSSGDVDGDISMLKEEVERLSLEEHRLDDRIREMQERLRSLSEDENKQKFLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYLQRRYRIILRSTMGPIDVYLISQFEERFEEINGPEPPVSLPLPSSSGSNEPPVAETVPAECSAKGLEPQPQIPSHTYSDLNTSQDFGGGMMKIVPSDADNDADYWLLSDADISITDMWRTDLLIGME 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03525 436 SUPERFAMILY "Winged helix" DNA-binding domain 151 214 IPR036390 -
Arst2g03525 436 PANTHER TRANSCRIPTION FACTOR E2F 95 427 IPR015633 GO:0000978|GO:0006357
Arst2g03525 436 MobiDBLite consensus disorder prediction 86 117 - -
Arst2g03525 436 MobiDBLite consensus disorder prediction 344 390 - -
Arst2g03525 436 SMART E2F_TDP_2 151 216 IPR003316 GO:0005667|GO:0006355
Arst2g03525 436 Gene3D - 222 332 - -
Arst2g03525 436 MobiDBLite consensus disorder prediction 126 146 - -
Arst2g03525 436 Gene3D - 145 218 IPR036388 -
Arst2g03525 436 CDD E2F_DD 231 332 IPR032198 GO:0046983
Arst2g03525 436 Pfam E2F transcription factor CC-MB domain 231 331 IPR032198 GO:0046983
Arst2g03525 436 SUPERFAMILY E2F-DP heterodimerization region 228 332 IPR037241 -
Arst2g03525 436 MobiDBLite consensus disorder prediction 1 146 - -
Arst2g03525 436 FunFam E2F transcription factor 1 145 218 - -
Arst2g03525 436 Pfam E2F/DP family winged-helix DNA-binding domain 153 216 IPR003316 GO:0005667|GO:0006355
Arst2g03525 436 Coils Coil 228 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03525 Arst-Chr2 92064552 92069013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03525 17 430 E2F-DP Transcription Factor Family AT2G36010 57.110 6.66e-157 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Arst2g03525 E2F_CC-MB 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03525 K06620 - gmx:100811762 595.89